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contig_metadata

28 rows where bioproject = "PRJNA839281" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 28 ✖

bioproject 1

  • PRJNA839281 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
829837 829837 PRJNA839281_S_NODE_34001_length_163_cov_0.894737_g33732_i0 PRJNA839281 34001 163 0.894737 1.45842131 Floydiella terrestris 51328 Plants Plants 93.5 8.01e-15   NTclustered gi|304322936|ref|NC_014346.1| 51328 g33732 i0 96.429 1.8159509202454 56 2 34 0 1 56 36698 36753 Floydiella terrestris chloroplast, complete genome blastn 296 93.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chaetopeltidales Chaetopeltidaceae Floydiella Floydiella terrestris
3380631 3380631 PRJNA839281_S_NODE_33363_length_163_cov_0.894737_g33094_i0 PRJNA839281 33363 163 0.894737 1.45842131 Volvox carteri 3067 Plants Plants 91.6 2.88e-14   NTclustered gi|302835134|ref|XM_002949083.1| 3068 g33094 i0 79.286 0.858895705521472 140 22 83 7 28 163 4570 4434 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_89530), partial mRNA blastn 140 91.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
7207931 7207931 PRJNA839281_S_NODE_26886_length_167_cov_0.864407_g26617_i0 PRJNA839281 26886 167 0.864407 1.44355969 Chlorella variabilis 554065 Plants Plants 56.5 0.001   NTclustered gi|552820939|ref|XM_005845654.1| 554065 g26617 i0 96.97 5.10179640718563 33 1 20 0 114 146 2368 2336 Chlorella variabilis hypothetical protein (CHLNCDRAFT_136874) mRNA, complete cds blastn 852 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
7608487 7608487 PRJNA839281_S_NODE_7126_length_303_cov_1.996063_g6857_i0 PRJNA839281 7126 303 1.996063 6.04807089 Eukaryota 2759 Plants Plants 152 4.72e-45   NR KAK9788151.1 706552 g6857 i0 71.4 10.2871287128713 98 28 97 0 294 1 1 98 KAK9788151.1 hypothetical protein WJX73_007414 [Symbiochloris irregularis] diamond 3117 152 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
8482726 8482726 PRJNA839281_S_NODE_4727_length_421_cov_2.403226_g4458_i0 PRJNA839281 4727 421 2.403226 10.11758146 Chlorella variabilis 554065 Plants Plants 274 7.95e-69   NTclustered gi|552840730|ref|XM_005850063.1| 554065 g4458 i0 79.25 54.790973871734 400 77 94 5 25 421 61 457 Chlorella variabilis 40S ribosomal protein S18 (CHLNCDRAFT_34417) mRNA, complete cds blastn 23067 274 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
14857543 14857543 PRJNA839281_S_NODE_18252_length_193_cov_1.062500_g17983_i0 PRJNA839281 18252 193 1.0625 2.050625 Chlorellales 35460 Plants Plants 112 3.06e-30   NR XP_005645730.1 574566 g17983 i0 83.3 20.5336787564767 60 10 93.3 0 193 14 58 117 XP_005645730.1 ribosomal protein S1 [Coccomyxa subellipsoidea C-169] diamond 3963 112 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
17407840 17407840 PRJNA839281_S_NODE_19114_length_189_cov_1.692857_g18845_i0 PRJNA839281 19114 189 1.692857 3.19949973 Chlamydomonas reinhardtii 3055 Plants Plants 137 4.349999999999999e-28   NTclustered gi|2082258287|ref|XM_043067367.1| 3055 g18845 i0 80.435 0.973544973544973 184 32 96 4 2 183 1333 1152 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467616v5), mRNA blastn 184 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
21231763 21231763 PRJNA839281_S_NODE_24217_length_172_cov_4.016260_g23948_i0 PRJNA839281 24217 172 4.01626 6.9079672 Polytomella parva 51329 Plants Plants 67.6 5.15e-7   NTclustered gi|1861356351|gb|MT377403.1| 51329 g23948 i0 91.667 0.441860465116279 48 4 28 0 121 168 1134 1087 Polytomella parva clone 0016314495 nucleolin rDNA chromatin transcription factor (NUCL) mRNA, complete cds; plastid blastn 76 67.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
21231964 21231964 PRJNA839281_S_NODE_4617_length_430_cov_2.026247_g4348_i0 PRJNA839281 4617 430 2.026247 8.7128621 Chlamydomonas eustigma 1157962 Plants Plants 178 2.32e-52   NR GAX84818.1 1157962 g4348 i0 60.7 2.97209302325581 140 55 97.7 0 10 429 123 262 GAX84818.1 hypothetical protein CEUSTIGMA_g12239.t1 [Chlamydomonas eustigma] diamond 1278 178 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
25457056 25457056 PRJNA839281_S_NODE_38240_length_160_cov_3.072072_g37971_i0 PRJNA839281 38240 160 3.072072 4.9153152 Eukaryota 2759 Plants Plants 134 4.61e-27   NTclustered gi|926773763|ref|XM_014039902.1| 145388 g37971 i0 85.938 80.6125 128 14 79 4 1 126 408 283 Monoraphidium neglectum 60S ribosomal protein L19-2 mRNA blastn 12898 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
27402424 27402424 PRJNA839281_S_NODE_34783_length_162_cov_1.353982_g34514_i0 PRJNA839281 34783 162 1.353982 2.19345084 Trebouxia sp. A1-2 2608996 Plants Plants 56.2 2e-7   NR KAA6416439.1 2608996 g34514 i0 50.9 2.94444444444444 53 25 98.1 1 161 3 241 292 KAA6416439.1 MAG: zinc transporter [Trebouxia sp. A1-2] diamond 477 56.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
27474002 27474002 PRJNA839281_S_NODE_17463_length_196_cov_2.401361_g17194_i0 PRJNA839281 17463 196 2.401361 4.70666756 Chlorophyceae 3166 Plants Plants 106 3.0200000000000003e-27   NR GFH31540.1 44745 g17194 i0 73.8 3.97959183673469 65 17 99.5 0 2 196 12 76 GFH31540.1 ribosomal_S13_N domain-containing protein, partial [Haematococcus lacustris] diamond 780 106 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27655140 27655140 PRJNA839281_S_NODE_25924_length_168_cov_1.285714_g25655_i0 PRJNA839281 25924 168 1.285714 2.15999952 Micractinium conductrix 554055 Plants Plants 42 0.0253   NR PSC70206.1 554055 g25655 i0 45.5 0.785714285714286 44 22 78.6 1 134 3 149 190 PSC70206.1 putative E3 ubiquitin-ligase XBOS34 [Micractinium conductrix] diamond 132 42 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
28199965 28199965 PRJNA839281_S_NODE_21386_length_181_cov_1.265152_g21117_i0 PRJNA839281 21386 181 1.265152 2.28992512 Eukaryota 2759 Plants Plants 57.8 7.98e-8   NR KAK9816284.1 904363 g21117 i0 57.1 3.49723756906077 49 20 81.2 1 35 181 23 70 KAK9816284.1 hypothetical protein WJX74_004177 [Apatococcus lobatus] diamond 633 58.2 0.993127147766323 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Apatococcus Apatococcus lobatus
28317973 28317973 PRJNA839281_S_NODE_29406_length_165_cov_1.862069_g29137_i0 PRJNA839281 29406 165 1.862069 3.07241385 Chlamydomonas incerta 51695 Plants Plants 62 9.24e-10   NR KAG2444307.1 51695 g29137 i0 64.4 2.14545454545455 59 17 100 1 1 165 26 84 KAG2444307.1 hypothetical protein HXX76_001064 [Chlamydomonas incerta] diamond 354 62 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
28381110 28381110 PRJNA839281_S_NODE_17986_length_194_cov_1.400000_g17717_i0 PRJNA839281 17986 194 1.4 2.716 Chlorella vulgaris 3077 Plants Plants 77 1.55e-14   NR KAI3436301.1 3077 g17717 i0 66 3.8659793814433 50 17 77.3 0 194 45 197 246 KAI3436301.1 hypothetical protein D9Q98_002354 [Chlorella vulgaris] diamond 750 77 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
28570504 28570504 PRJNA839281_S_NODE_19967_length_186_cov_1.116788_g19698_i0 PRJNA839281 19967 186 1.116788 2.07722568 Volvox africanus 51714 Plants Plants 88.6 8.16e-21   NR GIL65113.1 51714 g19698 i0 69.4 4 62 19 100 0 1 186 28 89 GIL65113.1 hypothetical protein Vafri_18930, partial [Volvox africanus] diamond 744 88.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
28579156 28579156 PRJNA839281_S_NODE_12767_length_224_cov_1.062857_g12498_i0 PRJNA839281 12767 224 1.062857 2.38079968 Eukaryota 2759 Plants Plants 58.9 5.76e-8   NR KAK9809093.1 41462 g12498 i0 41.2 1.88839285714286 68 39 91.1 1 4 207 202 268 KAK9809093.1 hypothetical protein WJX72_009300 [[Myrmecia] bisecta] diamond 423 58.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
28633975 28633975 PRJNA839281_S_NODE_27707_length_166_cov_2.051282_g27438_i0 PRJNA839281 27707 166 2.051282 3.40512812 Edaphochlamys debaryana 47281 Plants Plants 51.6 9.46e-6   NR KAG2499376.1 47281 g27438 i0 49 0.921686746987952 51 26 92.2 0 161 9 456 506 KAG2499376.1 hypothetical protein HYH03_002951 [Edaphochlamys debaryana] diamond 153 51.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
28799844 28799844 PRJNA839281_S_NODE_19867_length_186_cov_2.080292_g19598_i0 PRJNA839281 19867 186 2.080292 3.86934312 Eukaryota 2759 Plants Plants 85.9 9.58e-18   NR WIA33097.1 3088 g19598 i0 54.1 4.91935483870968 61 28 98.4 0 185 3 228 288 WIA33097.1 hypothetical protein OEZ86_006251 [Tetradesmus obliquus] diamond 915 86.3 0.995365005793743 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29139194 29139194 PRJNA839281_S_NODE_23029_length_176_cov_1.480315_g22760_i0 PRJNA839281 23029 176 1.480315 2.6053544 Picochlorum sp. BPE23 2696299 Plants Plants 52 3.29e-6   NR KAI8106175.1 2696299 g22760 i0 57.1 2.0625 42 18 71.6 0 130 5 6 47 KAI8106175.1 hypothetical protein M9435_000722 [Picochlorum sp. BPE23] diamond 363 52 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
29557683 29557683 PRJNA839281_S_NODE_18970_length_190_cov_1.085106_g18701_i0 PRJNA839281 18970 190 1.085106 2.0617014 Chlorellaceae 35461 Plants Plants 75.1 6.41e-15   NR XP_011399790.1 3075 g18701 i0 64.3 11.7631578947368 56 20 88.4 0 22 189 27 82 XP_011399790.1 Signal peptidase complex catalytic subunit SEC11C [Auxenochlorella protothecoides] diamond 2235 75.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
30781358 30781358 PRJNA839281_S_NODE_30234_length_165_cov_0.879310_g29965_i0 PRJNA839281 30234 165 0.87931 1.4508615 Sanguina aurantia 2578422 Plants Plants 65.1 1.67e-10   NR MEW5316769.1 2578422 g29965 i0 54.7 4.69090909090909 53 24 96.4 0 161 3 405 457 MEW5316769.1 hypothetical protein [Sanguina aurantia] diamond 774 65.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
31318561 31318561 PRJNA839281_S_NODE_39115_length_154_cov_2.076190_g38846_i0 PRJNA839281 39115 154 2.07619 3.1973326 Symbiochloris irregularis 706552 Plants Plants 44.7 0.00233   NR KAK9798164.1 706552 g38846 i0 41.3 1.85064935064935 46 27 89.6 0 138 1 108 153 KAK9798164.1 hypothetical protein WJX73_003251 [Symbiochloris irregularis] diamond 285 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
31382002 31382002 PRJNA839281_S_NODE_13696_length_217_cov_1.107143_g13427_i0 PRJNA839281 13696 217 1.107143 2.40250031 Auxenochlorella protothecoides 3075 Plants Plants 71.6 1.76e-12   NR XP_011395923.1 3075 g13427 i0 53.4 1.00921658986175 73 33 99.5 1 216 1 634 706 XP_011395923.1 Aminopeptidase N [Auxenochlorella protothecoides] diamond 219 71.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
31928054 31928054 PRJNA839281_S_NODE_19997_length_186_cov_1.116788_g19728_i0 PRJNA839281 19997 186 1.116788 2.07722568 Eukaryota 2759 Plants Plants 70.5 2.86e-12   NR PRW45739.1 3076 g19728 i0 54.1 3.91935483870968 61 28 98.4 0 2 184 958 1018 PRW45739.1 ATP-binding cassette superfamily [Chlorella sorokiniana] diamond 729 71.2 0.990168539325843 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
32204403 32204403 PRJNA839281_S_NODE_9018_length_265_cov_1.240741_g8749_i0 PRJNA839281 9018 265 1.240741 3.28796365 Auxenochlorella protothecoides 3075 Plants Plants 89 5.76e-19   NR XP_011399144.1 3075 g8749 i0 53.3 3.04528301886792 90 40 99.6 1 1 264 197 286 XP_011399144.1 60S ribosomal protein L5-1 [Auxenochlorella protothecoides] diamond 807 89 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
32835773 32835773 PRJNA839281_S_NODE_17580_length_196_cov_1.149660_g17311_i0 PRJNA839281 17580 196 1.14966 2.2533336 Auxenochlorella protothecoides 3075 Plants Plants 52.4 3.57e-6   NR XP_011400232.1 3075 g17311 i0 41.5 1.86734693877551 65 34 93.4 1 11 193 85 149 XP_011400232.1 Heterogeneous nuclear ribonucleoprotein H [Auxenochlorella protothecoides] diamond 366 52.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;