RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA839281", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA839281 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32046247 32046247 PRJNA839281_S_NODE_10238_length_248_cov_0.904523_g9969_i0 PRJNA839281 10238 248 0.904523 2.24321704 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 51.6 2.96e-5   NR CAF0898274.1 104777 g9969 i0 41 1.48790322580645 61 31 73.8 1 187 5 389 444 CAF0898274.1 unnamed protein product [Brachionus calyciflorus] diamond 369 51.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
32086281 32086281 PRJNA839281_S_NODE_29358_length_165_cov_2.629310_g29089_i0 PRJNA839281 29358 165 2.62931 4.3383615 root 1 Root_unresolved Root_unresolved 42.7 0.0102   NR CAF0704577.1 104777 g29089 i0 40.8 1.81818181818182 49 29 89.1 0 149 3 5 53 CAF0704577.1 unnamed protein product [Brachionus calyciflorus] diamond 300 43.1 0.990719257540603 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;