RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA839281", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA839281 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5058360 5058360 PRJNA839281_S_NODE_31684_length_164_cov_0.886957_g31415_i0 PRJNA839281 31684 164 0.886957 1.45460948 Metazoa 33208 Cnidaria other_Eukaryota 54.7 0.004   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g31415 i0 96.875 3.98170731707317 32 1 20 0 133 164 9217588 9217557 Anemonia sulcata genome assembly, chromosome: 9 blastn 653 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
7208126 7208126 PRJNA839281_S_NODE_5706_length_354_cov_1.150820_g5437_i0 PRJNA839281 5706 354 1.15082 4.0739028 Metazoa 33208 Cnidaria other_Eukaryota 171 2.88e-49   NR XP_048575640.1 45351 g5437 i0 68.6 49 118 37 100 0 1 354 245 362 XP_048575640.1 60S ribosomal protein L3 [Nematostella vectensis] diamond 17346 172 0.994186046511628 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
27852773 27852773 PRJNA839281_S_NODE_24844_length_171_cov_1.180328_g24575_i0 PRJNA839281 24844 171 1.180328 2.01836088 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 96.7 9.9700000000000009e-22   NR XP_065053563.1 499914 g24575 i0 73.7 2 57 15 100 0 1 171 350 406 XP_065053563.1 7-dehydrocholesterol reductase-like [Rhopilema esculentum] diamond 342 97.1 0.995880535530381 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
27852774 27852774 PRJNA839281_S_NODE_27984_length_166_cov_1.076923_g27715_i0 PRJNA839281 27984 166 1.076923 1.78769218 root 1 Root_unresolved Root_unresolved 71.2 6.59e-14   NR XP_031559276.1 6105 g27715 i0 57.4 11.7650602409639 54 23 97.6 0 2 163 10 63 XP_031559276.1 40S ribosomal protein S19-like [Actinia tenebrosa] diamond 1953 71.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
29210693 29210693 PRJNA839281_S_NODE_37729_length_161_cov_0.910714_g37460_i0 PRJNA839281 37729 161 0.910714 1.46624954 Anthozoa 6101 Cnidaria other_Eukaryota 70.5 2e-12   NR XP_020911743.1 2652724 g37460 i0 68 5.59006211180124 50 16 93.2 0 152 3 216 265 XP_020911743.1 tripeptidyl-peptidase 1 [Exaiptasia diaphana] diamond 900 70.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
29494705 29494705 PRJNA839281_S_NODE_20930_length_182_cov_3.248120_g20661_i0 PRJNA839281 20930 182 3.24812 5.9115784 Metazoa 33208 Cnidaria other_Eukaryota 43.1 0.0122   NR PFX25529.1 50429 g20661 i0 82.6 3.13186813186813 23 4 37.9 0 125 57 672 694 PFX25529.1 Transposon Tf2-9 polyprotein [Stylophora pistillata] diamond 570 43.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
30789820 30789820 PRJNA839281_S_NODE_34154_length_163_cov_0.894737_g33885_i0 PRJNA839281 34154 163 0.894737 1.45842131 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.1 2.73e-12   NR XP_066923410.1 252671 g33885 i0 57.7 1.89570552147239 52 22 95.7 0 158 3 469 520 XP_066923410.1 sphingosine-1-phosphate lyase 1-like [Clytia hemisphaerica] diamond 309 70.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
31327041 31327041 PRJNA839281_S_NODE_36475_length_161_cov_1.812500_g36206_i0 PRJNA839281 36475 161 1.8125 2.918125 Metazoa 33208 Cnidaria other_Eukaryota 43.9 0.00486   NR XP_044168355.1 45264 g36206 i0 48.8 2.34782608695652 43 20 80.1 1 129 1 17 57 XP_044168355.1 myoferlin-like isoform X3 [Acropora millepora] diamond 378 43.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;