RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA839281", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 3 ✖

tax_clade 1

  • Discoba · 3 ✖

bioproject 1

  • PRJNA839281 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27212551 27212551 PRJNA839281_S_NODE_34942_length_162_cov_0.973451_g34673_i0 PRJNA839281 34942 162 0.973451 1.57699062 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 67 3.49e-11   NR XP_044553479.1 51637 g34673 i0 66 2.88888888888889 50 17 92.6 0 150 1 874 923 XP_044553479.1 uncharacterized protein C9374_014047 [Naegleria lovaniensis] diamond 468 67 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30623223 30623223 PRJNA839281_S_NODE_15733_length_205_cov_0.980769_g15464_i0 PRJNA839281 15733 205 0.980769 2.01057645 Acrasis kona 1008807 Heterolobosea other_Eukaryota 43.1 0.0165   NR KAL0484427.1 1008807 g15464 i0 36.4 0.965853658536585 66 42 96.6 0 200 3 936 1001 KAL0484427.1 flagella-associated protein [Acrasis kona] diamond 198 43.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30623226 30623226 PRJNA839281_S_NODE_22053_length_179_cov_1.176923_g21784_i0 PRJNA839281 22053 179 1.176923 2.10669217 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 45.1 0.00196   NR XP_044567946.1 5763 g21784 i0 61.1 3.15083798882682 36 14 60.3 0 54 161 10 45 XP_044567946.1 uncharacterized protein FDP41_010298 [Naegleria fowleri] diamond 564 45.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;