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contig_metadata

13 rows where bioproject = "PRJNA839281" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 13 ✖

bioproject 1

  • PRJNA839281 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16132434 16132434 PRJNA839281_S_NODE_30893_length_165_cov_0.879310_g30624_i0 PRJNA839281 30893 165 0.87931 1.4508615 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.014   NTclustered gi|66808516|ref|XM_632889.1| 352472 g30624 i0 100 0.16969696969697 28 0 17 0 13 40 3291 3264 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0285955) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
18681183 18681183 PRJNA839281_S_NODE_6555_length_321_cov_1.481618_g6286_i0 PRJNA839281 6555 321 1.481618 4.75599378 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 195 4.73e-45   NTclustered gi|470531494|ref|XM_004358017.1| 1257118 g6286 i0 86.111 17.208722741433 180 25 56 0 142 321 1370 1191 Acanthamoeba castellanii str. Neff ribonucleosidediphosphate reductase, alpha subunit (ACA1_119180), partial mRNA blastn 5524 195 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23782045 23782045 PRJNA839281_S_NODE_27679_length_166_cov_2.777778_g27410_i0 PRJNA839281 27679 166 2.777778 4.61111148 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 71.3 3.84e-8   NTclustered gi|470511767|ref|XM_004352013.1| 1257118 g27410 i0 89.286 0.746987951807229 56 6 34 0 20 75 227 282 Acanthamoeba castellanii str. Neff ribosomal protein S7e, putative (ACA1_036040), partial mRNA blastn 124 71.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26959586 26959586 PRJNA839281_S_NODE_16762_length_200_cov_0.940397_g16493_i0 PRJNA839281 16762 200 0.940397 1.880794 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 98.2 7.52e-23   NR XP_641424.1 352472 g16493 i0 67.2 4.8 64 21 96 0 6 197 34 97 XP_641424.1 myosin light chain kinase [Dictyostelium discoideum AX4] diamond 960 98.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27212549 27212549 PRJNA839281_S_NODE_3182_length_658_cov_4.170772_g2930_i0 PRJNA839281 3182 658 4.170772 27.44367976 Heterostelium album PN5 2086695 Evosea other_Eukaryota 177 1.24e-51   NR XP_020433716.1 670386 g2930 i0 42.9 0.90273556231003 198 109 90.3 2 594 1 39 232 XP_020433716.1 component of the counting factor complex [Heterostelium album PN500] diamond 594 177 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28412787 28412787 PRJNA839281_S_NODE_16386_length_201_cov_4.190789_g16117_i0 PRJNA839281 16386 201 4.190789 8.42348589 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 95.5 3.58e-22   NR KAH3743745.1 1580589 g16117 i0 66.1 0.925373134328358 62 21 92.5 0 187 2 4 65 KAH3743745.1 60S ribosomal protein L14 [Pelomyxa schiedti] diamond 186 95.5 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28854577 28854577 PRJNA839281_S_NODE_33788_length_163_cov_0.894737_g33519_i0 PRJNA839281 33788 163 0.894737 1.45842131 Cavenderia fasciculata 261658 Evosea other_Eukaryota 61.6 2.75e-9   NR XP_004359611.1 261658 g33519 i0 48.1 1.98773006134969 54 27 99.4 1 162 1 201 253 XP_004359611.1 Hypothetical protein yfeW precursor [Cavenderia fasciculata] diamond 324 61.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
29928499 29928499 PRJNA839281_S_NODE_30371_length_165_cov_0.879310_g30102_i0 PRJNA839281 30371 165 0.87931 1.4508615 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 47.4 3e-4   NR PRP79146.1 1890364 g30102 i0 38.8 0.890909090909091 49 30 89.1 0 12 158 207 255 PRP79146.1 hypothetical protein PROFUN_13096 [Planoprotostelium fungivorum] diamond 147 47.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30180985 30180985 PRJNA839281_S_NODE_7492_length_295_cov_1.138211_g7223_i0 PRJNA839281 7492 295 1.138211 3.35772245 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 66.2 3.5e-10   NR XP_641725.1 352472 g7223 i0 40.7 1.67796610169492 91 53 91.5 1 6 275 1 91 XP_641725.1 cysteine proteinase [Dictyostelium discoideum AX4] diamond 495 66.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31160127 31160127 PRJNA839281_S_NODE_14255_length_213_cov_1.865854_g13986_i0 PRJNA839281 14255 213 1.865854 3.97426902 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 55.8 2.16e-7   NR KAH3756281.1 1580589 g13986 i0 41.3 0.887323943661972 63 34 88.7 1 8 196 1 60 KAH3756281.1 ganglioside GM2 activator [Pelomyxa schiedti] diamond 189 55.8 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31792832 31792832 PRJNA839281_S_NODE_8777_length_269_cov_1.145455_g8508_i0 PRJNA839281 8777 269 1.145455 3.08127395 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 124 7.91e-31   NR PRP76070.1 1890364 g8508 i0 69.7 0.992565055762082 89 27 99.3 0 267 1 828 916 PRP76070.1 inositol-3-phosphate synthase [Planoprotostelium fungivorum] diamond 267 124 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31824540 31824540 PRJNA839281_S_NODE_33097_length_163_cov_1.192982_g32828_i0 PRJNA839281 33097 163 1.192982 1.94456066 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 81.3 9.34e-17   NR KAH3758173.1 1580589 g32828 i0 63.5 0.957055214723926 52 19 95.7 0 162 7 202 253 KAH3758173.1 abc transporter [Pelomyxa schiedti] diamond 156 81.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32867276 32867276 PRJNA839281_S_NODE_9400_length_259_cov_1.214286_g9131_i0 PRJNA839281 9400 259 1.214286 3.14500074 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 58.5 1.29e-7   NR PRP88610.1 1890364 g9131 i0 39.4 0.764478764478765 66 40 76.4 0 5 202 897 962 PRP88610.1 echinoderm microtubule-associated protein-like 6 [Planoprotostelium fungivorum] diamond 198 58.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;