RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA835051" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA835051 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
825447 825447 PRJNA835051_S_NODE_11621_length_314_cov_1.571956_g11325_i0 PRJNA835051 11621 314 1.571956 4.93594184 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.008   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g11325 i0 100 0.181528662420382 29 0 9 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
3376316 3376316 PRJNA835051_S_NODE_120263_length_156_cov_2.097345_g119967_i0 PRJNA835051 120263 156 2.097345 3.2718582 Nepovirus poaceae 3052358 Viruses Viruses 255 9.12e-64   NTclustered gi|2500669168|ref|NC_078655.1| 2822470 g119967 i0 96.154 1 156 6 100 0 1 156 3825 3980 Poaceae Liege nepovirus A isolate Antheit polyprotein (QK751_sRNA2gp1) gene, complete cds blastn 156 255 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus poaceae
5929664 5929664 PRJNA835051_S_NODE_80965_length_184_cov_1.262411_g80669_i0 PRJNA835051 80965 184 1.262411 2.32283624 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.001   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g80669 i0 100 0.625 30 0 16 0 155 184 85 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
7204794 7204794 PRJNA835051_S_NODE_82946_length_182_cov_1.719424_g82650_i0 PRJNA835051 82946 182 1.719424 3.12935168 Nepovirus poaceae 3052358 Viruses Viruses 309 8.32e-80   NTclustered gi|2500669170|ref|NC_078656.1| 2822470 g82650 i0 97.253 2 182 5 100 0 1 182 7039 7220 Poaceae Liege nepovirus A isolate Antheit polyprotein (QK751_sRNA1gp1) gene, complete cds blastn 364 309 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus poaceae
12304952 12304952 PRJNA835051_S_NODE_23070_length_267_cov_1.955357_g22774_i0 PRJNA835051 23070 267 1.955357 5.22080319 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.007   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g22774 i0 100 0.213483146067416 29 0 11 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
12305284 12305284 PRJNA835051_S_NODE_46350_length_222_cov_1.061453_g46054_i0 PRJNA835051 46350 222 1.061453 2.35642566 Porcine bastrovirus 2588662 Viruses Viruses 58.4 4.23e-4   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g46054 i0 94.737 0.297297297297297 38 1 17 1 1 37 13 50 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 66 58.4 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
18676657 18676657 PRJNA835051_S_NODE_10255_length_324_cov_1.604982_g9959_i0 PRJNA835051 10255 324 1.604982 5.20014168 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.008   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g9959 i0 100 0.175925925925926 29 0 9 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
19952819 19952819 PRJNA835051_S_NODE_68596_length_195_cov_2.177632_g68300_i0 PRJNA835051 68596 195 2.177632 4.2463824 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g68300 i0 100 0.292307692307692 29 0 15 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
22502140 22502140 PRJNA835051_S_NODE_101838_length_168_cov_1.528000_g101542_i0 PRJNA835051 101838 168 1.528 2.56704 Partitiviridae sp. 1955170 Viruses Viruses 274 2.7699999999999997e-69   NTclustered gi|2120560198|gb|MZ556410.1| 1955170 g101542 i0 96.386 3.97619047619048 166 6 99 0 1 166 1515 1680 MAG: Partitiviridae sp. isolate 248-k141_5206 putative RNA-dependent RNA polymerase gene, partial cds blastn 668 274 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Partitiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;