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contig_metadata

24 rows where bioproject = "PRJNA835051" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA835051 · 24 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2101566 2101566 PRJNA835051_S_NODE_44242_length_225_cov_1.307692_g43946_i0 PRJNA835051 44242 225 1.307692 2.942307 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g43946 i0 100 0.648888888888889 30 0 13 0 1 30 13 42 Carnation latent virus isolate KL, complete genome blastn 146 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
2102127 2102127 PRJNA835051_S_NODE_87922_length_178_cov_1.837037_g87626_i0 PRJNA835051 87922 178 1.837037 3.26992586 Ilarvirus SnIV1 3429937 Viruses Viruses 318 1.34e-82   NTclustered gi|2484149205|tpg|BK061655.1| 2676886 g87626 i0 98.876 29.8539325842697 178 2 100 0 1 178 458 635 TPA_asm: Solanum nigrum ilarvirus 1 isolate SRR11680723 segment RNA1 replicase-associated polyprotein (1a) gene, complete cds blastn 5314 318 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Ilarvirus Ilarvirus SnIV1
3376841 3376841 PRJNA835051_S_NODE_40323_length_231_cov_1.739362_g40027_i0 PRJNA835051 40323 231 1.739362 4.01792622 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g40027 i0 100 0.61038961038961 29 0 13 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3377283 3377283 PRJNA835051_S_NODE_76583_length_188_cov_0.813793_g76287_i0 PRJNA835051 76583 188 0.813793 1.52993084 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.004   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g76287 i0 100 0.303191489361702 29 0 15 0 160 188 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
4654897 4654897 PRJNA835051_S_NODE_7684_length_347_cov_2.000000_g7388_i0 PRJNA835051 7684 347 2 6.94 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.003   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g7388 i0 96.97 0.175792507204611 33 1 10 0 315 347 38 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
4655066 4655066 PRJNA835051_S_NODE_93224_length_174_cov_1.778626_g92928_i0 PRJNA835051 93224 174 1.778626 3.09480924 Tobamovirus tabaci 3432891 Viruses Viruses 311 2.19e-80   NTclustered gi|2813525801|dbj|LC846392.1| 12242 g92928 i0 98.851 99.9597701149425 174 2 100 0 1 174 3715 3542 Tobacco mosaic virus TMV-Du-CNU1 genomic RNA, complete genome blastn 17393 311 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
5929048 5929048 PRJNA835051_S_NODE_32925_length_244_cov_1.796020_g32629_i0 PRJNA835051 32925 244 1.79602 4.3822888 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g32629 i0 100 0.577868852459016 29 0 12 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8478478 8478478 PRJNA835051_S_NODE_12987_length_306_cov_1.794677_g12691_i0 PRJNA835051 12987 306 1.794677 5.49171162 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g12691 i0 100 0.464052287581699 30 0 10 0 277 306 42 13 Carnation latent virus isolate KL, complete genome blastn 142 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8478955 8478955 PRJNA835051_S_NODE_43667_length_226_cov_1.295082_g43371_i0 PRJNA835051 43667 226 1.295082 2.92688532 Potexvirus pepini 3433856 Viruses Viruses 418 1.7199999999999998e-112   NTclustered gi|375808845|gb|JN835466.1| 112229 g43371 i0 100 75.7610619469027 226 0 100 0 1 226 3757 3982 Pepino mosaic virus strain CH2, complete genome blastn 17122 418 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
11030380 11030380 PRJNA835051_S_NODE_88409_length_178_cov_1.066667_g88113_i0 PRJNA835051 88409 178 1.066667 1.89866726 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.004   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g88113 i0 100 0.320224719101124 29 0 16 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
12305522 12305522 PRJNA835051_S_NODE_65090_length_199_cov_1.230769_g64794_i0 PRJNA835051 65090 199 1.230769 2.44923031 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g64794 i0 96.97 0.306532663316583 33 0 16 1 1 32 6 38 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
14853905 14853905 PRJNA835051_S_NODE_2852_length_463_cov_3.100000_g2561_i0 PRJNA835051 2852 463 3.1 14.353 Potexvirus pepini 3433856 Viruses Viruses 845 0   NTclustered gi|1740135758|gb|MN182534.1| 112229 g2561 i0 100 95.511879049676 457 0 99 0 1 457 5949 6405 Pepino mosaic virus strain PMV.21930919, complete genome blastn 44222 845 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
14854406 14854406 PRJNA835051_S_NODE_70252_length_193_cov_5.066667_g69956_i0 PRJNA835051 70252 193 5.066667 9.77866731 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g69956 i0 100 0.155440414507772 30 0 16 0 164 193 44 15 Carnation latent virus isolate KL, complete genome blastn 30 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
16128864 16128864 PRJNA835051_S_NODE_56553_length_208_cov_2.266667_g56257_i0 PRJNA835051 56553 208 2.266667 4.71466736 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g56257 i0 100 0.139423076923077 29 0 14 0 180 208 44 16 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
16129239 16129239 PRJNA835051_S_NODE_83213_length_182_cov_1.374101_g82917_i0 PRJNA835051 83213 182 1.374101 2.50086382 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g82917 i0 100 0.78021978021978 30 0 16 0 1 30 13 42 Carnation latent virus isolate KL, complete genome blastn 142 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
17404630 17404630 PRJNA835051_S_NODE_6714_length_359_cov_3.655063_g6418_i0 PRJNA835051 6714 359 3.655063 13.12167617 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.009   NTclustered gi|1995060321|gb|MN450069.1| 12164 g6418 i0 100 0.392757660167131 29 0 8 0 331 359 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
17404744 17404744 PRJNA835051_S_NODE_7674_length_347_cov_2.167763_g7378_i0 PRJNA835051 7674 347 2.167763 7.52213761 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.033   NTclustered gi|1995060321|gb|MN450069.1| 12164 g7378 i0 100 0.0806916426512968 28 0 8 0 320 347 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19080956 19080956 PRJNA835051_S_NODE_124355_length_154_cov_1.297297_g124059_i0 PRJNA835051 124355 154 1.297297 1.99783738 Potexvirus 12176 Viruses Viruses 285 1.14e-72   NTclustered gi|148283741|gb|EF408821.3| 112229 g124059 i0 100 58.974025974026 154 0 100 0 1 154 1183 1030 Pepino mosaic virus isolate PepMV-PK, complete genome blastn 9082 285 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
19952290 19952290 PRJNA835051_S_NODE_27896_length_255_cov_1.122642_g27600_i0 PRJNA835051 27896 255 1.122642 2.8627371 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g27600 i0 100 0.666666666666667 30 0 12 0 226 255 42 13 Carnation latent virus isolate KL, complete genome blastn 170 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
22503349 22503349 PRJNA835051_S_NODE_79898_length_185_cov_1.014085_g79602_i0 PRJNA835051 79898 185 1.014085 1.87605725 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.004   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g79602 i0 100 0.308108108108108 29 0 16 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
23777753 23777753 PRJNA835051_S_NODE_106299_length_165_cov_1.475410_g106003_i0 PRJNA835051 106299 165 1.47541 2.4344265 Potexvirus pepini 3433856 Viruses Viruses 305 9.59e-79   NTclustered gi|375808845|gb|JN835466.1| 112229 g106003 i0 100 58 165 0 100 0 1 165 300 136 Pepino mosaic virus strain CH2, complete genome blastn 9570 305 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
25052008 25052008 PRJNA835051_S_NODE_22400_length_269_cov_1.814159_g22104_i0 PRJNA835051 22400 269 1.814159 4.88008771 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.025   NTclustered gi|1995060321|gb|MN450069.1| 12164 g22104 i0 100 0.104089219330855 28 0 10 0 242 269 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
25455978 25455978 PRJNA835051_S_NODE_12960_length_306_cov_2.171103_g12664_i0 PRJNA835051 12960 306 2.171103 6.64357518 Potexvirus 12176 Viruses Viruses 560 3.84e-155   NTclustered gi|2675378618|gb|PP116314.1| 112229 g12664 i0 99.673 59.9150326797386 306 1 100 0 1 306 3429 3124 MAG: Pepino mosaic virus isolate 7452_PepMV, complete genome blastn 18334 560 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
25456154 25456154 PRJNA835051_S_NODE_50500_length_216_cov_1.872832_g50204_i0 PRJNA835051 50500 216 1.872832 4.04531712 Potexvirus 12176 Viruses Viruses 399 5.909999999999999e-107   NTclustered gi|1421680767|gb|MH550257.1| 112229 g50204 i0 100 100 216 0 100 0 1 216 1255 1470 Pepino mosaic virus isolate GR17-8b TGBp1, TGBp2, TGBp3, and CP genes, complete cds blastn 21600 399 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;