RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA835051" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA835051 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27749862 27749862 PRJNA835051_S_NODE_18404_length_282_cov_1.794979_g18108_i0 PRJNA835051 18404 282 1.794979 5.06184078 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 43.1 0.0397   NR HEY5236202.1 2047756 g18108 i0 36.5 0.787234042553192 74 46 78.7 1 51 272 1 73 HEY5236202.1 RluA family pseudouridine synthase [Rhabdochlamydiaceae bacterium] diamond 222 43.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
29896813 29896813 PRJNA835051_S_NODE_87111_length_179_cov_1.117647_g86815_i0 PRJNA835051 87111 179 1.117647 2.00058813 Waddlia chondrophila 71667 Bacteria Bacteria 43.5 0.00105   NR WP_211259953.1 71667 g86815 i0 52 0.837988826815642 50 24 83.8 0 6 155 14 63 WP_211259953.1 hypothetical protein, partial [Waddlia chondrophila] diamond 150 43.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae Waddlia Waddlia chondrophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;