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contig_metadata

12 rows where bioproject = "PRJNA835051", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 12 ✖

tax_kingdom 1

  • Pseudomonadati · 12 ✖

bioproject 1

  • PRJNA835051 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3377133 3377133 PRJNA835051_S_NODE_63923_length_200_cov_1.662420_g63627_i0 PRJNA835051 63923 200 1.66242 3.32484 Bryobacterales bacterium 2026791 Bacteria Bacteria 56.5 0.001   NTclustered gi|2575803349|emb|OY729422.1| 2026791 g63627 i0 100 0.15 30 0 15 0 10 39 3409521 3409492 MAG: Bryobacterales bacterium isolate d47adfd7-a82f-4c56-911c-b237267f53ff genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
5928662 5928662 PRJNA835051_S_NODE_123465_length_154_cov_2.576577_g123169_i0 PRJNA835051 123465 154 2.576577 3.96792858 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 180 5.56e-41   NTclustered gi|2874253889|emb|OY970064.1| 194844 g123169 i0 87.742 6.61688311688312 155 17 100 2 1 154 1411698 1411851 MAG: uncultured Acidobacteriaceae bacterium isolate MFD06092.bin.c.1 genome assembly, chromosome: 1 blastn 1019 180 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
8882486 8882486 PRJNA835051_S_NODE_130147_length_151_cov_1.768519_g129851_i0 PRJNA835051 130147 151 1.768519 2.67046369 Granulicella 940557 Bacteria Bacteria 279 5.19e-71   NTclustered gi|2874253750|emb|OY969625.1| 194844 g129851 i0 100 106.205298013245 151 0 100 0 1 151 1802 1652 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09495.bin.1.66 genome assembly, chromosome: 1 blastn 16037 279 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
26928081 26928081 PRJNA835051_S_NODE_53562_length_212_cov_1.686391_g53266_i0 PRJNA835051 53562 212 1.686391 3.57514892 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 42 0.0457   NR HEX6715910.1 2283092 g53266 i0 36.9 0.919811320754717 65 29 75 1 9 167 20 84 HEX6715910.1 beta-ketoacyl synthase N-terminal-like domain-containing protein [Pyrinomonadaceae bacterium] diamond 195 42 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27339222 27339222 PRJNA835051_S_NODE_110763_length_162_cov_1.588235_g110467_i0 PRJNA835051 110763 162 1.588235 2.5729407 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 42.7 0.00935   NR HVG25966.1 2052142 g110467 i0 42.3 0.962962962962963 52 20 96.3 2 7 162 101 142 HVG25966.1 cupin domain-containing protein [Acidobacteriaceae bacterium] diamond 156 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
28033926 28033926 PRJNA835051_S_NODE_45825_length_222_cov_3.178771_g45529_i0 PRJNA835051 45825 222 3.178771 7.05687162 Acidobacteriota bacterium 1978231 Bacteria Bacteria 56.2 4.99e-7   NR HEY7161227.1 1978231 g45529 i0 50 3.5 62 30 82.4 1 192 10 265 326 HEY7161227.1 PAS domain S-box protein [Acidobacteriota bacterium] diamond 777 56.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28444396 28444396 PRJNA835051_S_NODE_86886_length_179_cov_1.404412_g86590_i0 PRJNA835051 86886 179 1.404412 2.51389748 Terriglobia bacterium 2081523 Bacteria Bacteria 41.6 0.0405   NR MBZ5624850.1 2081523 g86590 i0 39.5 0.636871508379888 38 23 63.7 0 125 12 232 269 MBZ5624850.1 oligogalacturonate lyase family protein [Terriglobia bacterium] diamond 114 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
28475839 28475839 PRJNA835051_S_NODE_109506_length_163_cov_1.191667_g109210_i0 PRJNA835051 109506 163 1.191667 1.94241721 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 41.2 0.0394   NR HYR75838.1 2283092 g109210 i0 47.4 0.699386503067485 38 20 69.9 0 9 122 163 200 HYR75838.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 114 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29202144 29202144 PRJNA835051_S_NODE_122149_length_155_cov_1.705357_g121853_i0 PRJNA835051 122149 155 1.705357 2.64330335 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 43.1 0.00535   NR HEX6896637.1 2212468 g121853 i0 46.9 1.56774193548387 49 24 94.8 1 155 9 62 108 HEX6896637.1 hypothetical protein [Bryobacteraceae bacterium] diamond 243 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30749750 30749750 PRJNA835051_S_NODE_41574_length_229_cov_1.763441_g41278_i0 PRJNA835051 41574 229 1.763441 4.03827989 Acidobacteriota bacterium 1978231 Bacteria Bacteria 40.8 0.0452   NR PYX25340.1 1978231 g41278 i0 44.2 0.563318777292576 43 24 56.3 0 20 148 48 90 PYX25340.1 MAG: hypothetical protein DMG82_05435 [Acidobacteriota bacterium] diamond 129 40.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31350333 31350333 PRJNA835051_S_NODE_97416_length_171_cov_1.515625_g97120_i0 PRJNA835051 97416 171 1.515625 2.59171875 Blastocatellia bacterium 2052146 Bacteria Bacteria 42 0.0248   NR HWC77487.1 2052146 g97120 i0 36.5 0.912280701754386 52 33 91.2 0 8 163 67 118 HWC77487.1 DUF1080 domain-containing protein [Blastocatellia bacterium] diamond 156 42 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31508505 31508505 PRJNA835051_S_NODE_21476_length_272_cov_1.048035_g21180_i0 PRJNA835051 21476 272 1.048035 2.8506552 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 47 0.00174   NR HVN06836.1 2212468 g21180 i0 33.3 0.860294117647059 78 51 86 1 19 252 708 784 HVN06836.1 TonB-dependent receptor [Bryobacteraceae bacterium] diamond 234 47 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;