RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA835051", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA835051 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27758447 27758447 PRJNA835051_S_NODE_74064_length_190_cov_1.299320_g73768_i0 PRJNA835051 74064 190 1.29932 2.468708 Pseudomonadati 3379134 Bacteria Bacteria 42 0.0352   NR OPZ26225.1 1852901 g73768 i0 50 2.46315789473684 36 18 56.8 0 10 117 64 99 OPZ26225.1 MAG: Amidohydrolase [Lentisphaerae bacterium ADurb.BinA184] diamond 468 42 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium ADurb.BinA184
32898648 32898648 PRJNA835051_S_NODE_98940_length_170_cov_1.503937_g98644_i0 PRJNA835051 98940 170 1.503937 2.5566929 Lentisphaeria bacterium 2053569 Bacteria Bacteria 40.4 0.0464   NR MBR4956805.1 2053569 g98644 i0 42.2 0.794117647058823 45 21 79.4 1 161 27 81 120 MBR4956805.1 alanine racemase [Lentisphaeria bacterium] diamond 135 40.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;