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contig_metadata

29 rows where bioproject = "PRJNA835051" and tax_clade = "PVC group"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 29 ✖

bioproject 1

  • PRJNA835051 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17807120 17807120 PRJNA835051_S_NODE_63514_length_200_cov_3.025478_g63218_i0 PRJNA835051 63514 200 3.025478 6.050956 Bacteria 2 Bacteria Bacteria 191 3.53e-44   NTclustered gi|226525339|gb|FJ872375.1| 156588 g63218 i0 90.476 213.52 147 11 73 3 3 148 27616 27472 Uncultured Verrucomicrobia bacterium clone 286 genomic sequence blastn 42704 191 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         uncultured Verrucomicrobiota bacterium
26611272 26611272 PRJNA835051_S_NODE_38321_length_234_cov_2.151832_g38025_i0 PRJNA835051 38321 234 2.151832 5.03528688 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 72 1.6e-12   NR MBN1586862.1 2035772 g38025 i0 44.2 1.82051282051282 77 43 98.7 0 233 3 122 198 MBN1586862.1 DNA polymerase III subunit alpha [Candidatus Omnitrophota bacterium] diamond 426 72 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26611287 26611287 PRJNA835051_S_NODE_96041_length_172_cov_1.519380_g95745_i0 PRJNA835051 96041 172 1.51938 2.6133336 Phycisphaerales bacterium 2052180 Bacteria Bacteria 43.5 0.0078   NR MFM8872525.1 2052180 g95745 i0 45.1 0.88953488372093 51 27 87.2 1 7 156 159 209 MFM8872525.1 hypothetical protein [Phycisphaerales bacterium] diamond 153 43.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
26706160 26706160 PRJNA835051_S_NODE_31841_length_246_cov_2.034483_g31545_i0 PRJNA835051 31841 246 2.034483 5.00482818 Planctomycetota bacterium 2026780 Bacteria Bacteria 43.5 0.0187   NR MBL8696680.1 2026780 g31545 i0 37.7 0.646341463414634 53 26 56.1 1 233 96 202 254 MBL8696680.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Planctomycetota bacterium] diamond 159 43.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26833195 26833195 PRJNA835051_S_NODE_5581_length_378_cov_1.850746_g5285_i0 PRJNA835051 5581 378 1.850746 6.99581988 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 62 1.26e-8   NR MBE6414843.1 2026800 g5285 i0 70.8 0.380952380952381 48 13 37.3 1 238 98 184 231 MBE6414843.1 PEP-CTERM sorting domain-containing protein [Verrucomicrobiaceae bacterium] diamond 144 62 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
27117630 27117630 PRJNA835051_S_NODE_85382_length_180_cov_2.000000_g85086_i0 PRJNA835051 85382 180 2 3.6 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 41.6 0.0432   NR MEX2215741.1 2026777 g85086 i0 33.9 0.933333333333333 56 37 93.3 0 180 13 518 573 MEX2215741.1 isoleucine--tRNA ligase [Phycisphaeraceae bacterium] diamond 168 41.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium
27465591 27465591 PRJNA835051_S_NODE_24583_length_263_cov_1.745455_g24287_i0 PRJNA835051 24583 263 1.745455 4.59054665 Isosphaeraceae bacterium 2691532 Bacteria Bacteria 42.7 0.039   NR HKI18667.1 2691532 g24287 i0 38.3 0.684410646387833 60 32 62.7 1 202 38 160 219 HKI18667.1 ZIP family metal transporter [Isosphaeraceae bacterium] diamond 180 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae   Isosphaeraceae bacterium
27686825 27686825 PRJNA835051_S_NODE_118424_length_157_cov_2.500000_g118128_i0 PRJNA835051 118424 157 2.5 3.925 Verrucomicrobium sp. GAS474 1882831 Bacteria Bacteria 41.2 0.04   NR WP_157895220.1 1882831 g118128 i0 50 0.64968152866242 34 17 65 0 113 12 878 911 WP_157895220.1 sugar-binding protein [Verrucomicrobium sp. GAS474] diamond 102 41.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Verrucomicrobium Verrucomicrobium sp. GAS474
27686828 27686828 PRJNA835051_S_NODE_24684_length_263_cov_1.068182_g24388_i0 PRJNA835051 24684 263 1.068182 2.80931866 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42.7 0.0468   NR MES2707423.1 2026799 g24388 i0 39 0.673003802281369 59 34 67.3 1 247 71 429 485 MES2707423.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 177 42.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27686841 27686841 PRJNA835051_S_NODE_79364_length_185_cov_1.922535_g79068_i0 PRJNA835051 79364 185 1.922535 3.55668975 Phycisphaerales bacterium 2052180 Bacteria Bacteria 42.4 0.0203   NR NOT02072.1 2052180 g79068 i0 44.1 0.551351351351351 34 19 55.1 0 50 151 98 131 NOT02072.1 hypothetical protein [Phycisphaerales bacterium] diamond 102 42.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
27749862 27749862 PRJNA835051_S_NODE_18404_length_282_cov_1.794979_g18108_i0 PRJNA835051 18404 282 1.794979 5.06184078 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 43.1 0.0397   NR HEY5236202.1 2047756 g18108 i0 36.5 0.787234042553192 74 46 78.7 1 51 272 1 73 HEY5236202.1 RluA family pseudouridine synthase [Rhabdochlamydiaceae bacterium] diamond 222 43.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
27758447 27758447 PRJNA835051_S_NODE_74064_length_190_cov_1.299320_g73768_i0 PRJNA835051 74064 190 1.29932 2.468708 Pseudomonadati 3379134 Bacteria Bacteria 42 0.0352   NR OPZ26225.1 1852901 g73768 i0 50 2.46315789473684 36 18 56.8 0 10 117 64 99 OPZ26225.1 MAG: Amidohydrolase [Lentisphaerae bacterium ADurb.BinA184] diamond 468 42 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium ADurb.BinA184
27970569 27970569 PRJNA835051_S_NODE_23825_length_265_cov_1.819820_g23529_i0 PRJNA835051 23825 265 1.81982 4.822523 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.3 0.0142   NR MEM1186518.1 2026780 g23529 i0 39.7 0.713207547169811 63 30 71.3 1 22 210 165 219 MEM1186518.1 serine/threonine-protein kinase [Planctomycetota bacterium] diamond 189 44.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28223035 28223035 PRJNA835051_S_NODE_25406_length_261_cov_1.532110_g25110_i0 PRJNA835051 25406 261 1.53211 3.9988071 Phycisphaera sp. 2030824 Bacteria Bacteria 42.4 0.0193   NR MBI1336282.1 2030824 g25110 i0 35 0.919540229885057 80 47 92 1 240 1 6 80 MBI1336282.1 tyrosine-type recombinase/integrase [Phycisphaera sp.] diamond 240 42.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae Phycisphaera Phycisphaera sp.
28475840 28475840 PRJNA835051_S_NODE_128866_length_152_cov_0.880734_g128570_i0 PRJNA835051 128866 152 0.880734 1.33871568 Planctomycetota bacterium 2026780 Bacteria Bacteria 48.1 1.3e-4   NR MEZ6189435.1 2026780 g128570 i0 43.5 0.907894736842105 46 25 90.8 1 150 13 4 48 MEZ6189435.1 AAA family ATPase [Planctomycetota bacterium] diamond 138 48.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29075896 29075896 PRJNA835051_S_NODE_75768_length_188_cov_2.517241_g75472_i0 PRJNA835051 75768 188 2.517241 4.73241308 Tepidisphaerales bacterium 2795155 Bacteria Bacteria 41.6 0.0454   NR MFN4243212.1 2795155 g75472 i0 41.5 0.654255319148936 41 19 65.4 1 35 157 291 326 MFN4243212.1 glycosyltransferase [Tepidisphaerales bacterium] diamond 123 41.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales     Tepidisphaerales bacterium
29643678 29643678 PRJNA835051_S_NODE_9690_length_328_cov_1.996491_g9394_i0 PRJNA835051 9690 328 1.996491 6.54849048 Opitutales bacterium 2026772 Bacteria Bacteria 43.9 0.0357   NR MBT5816278.1 2026772 g9394 i0 51.1 0.411585365853659 45 15 37.5 3 268 146 83 124 MBT5816278.1 LacI family DNA-binding transcriptional regulator [Opitutales bacterium] diamond 135 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
29770198 29770198 PRJNA835051_S_NODE_72251_length_192_cov_0.879195_g71955_i0 PRJNA835051 72251 192 0.879195 1.6880544 Candidatus Brocadiaceae bacterium 2094028 Bacteria Bacteria 43.1 0.0138   NR NLW49299.1 2094028 g71955 i0 38.8 0.765625 49 29 75 1 23 166 274 322 NLW49299.1 hypothetical protein [Candidatus Brocadiaceae bacterium] diamond 147 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia Candidatus Brocadiales Candidatus Brocadiaceae   Candidatus Brocadiaceae bacterium
29833485 29833485 PRJNA835051_S_NODE_85871_length_180_cov_1.291971_g85575_i0 PRJNA835051 85871 180 1.291971 2.3255478 Planctomycetota bacterium 2026780 Bacteria Bacteria 42 0.0314   NR MCB9916047.1 2026780 g85575 i0 43.8 0.8 48 24 80 1 10 153 11 55 MCB9916047.1 acyl-CoA dehydrogenase [Planctomycetota bacterium] diamond 144 42 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29896813 29896813 PRJNA835051_S_NODE_87111_length_179_cov_1.117647_g86815_i0 PRJNA835051 87111 179 1.117647 2.00058813 Waddlia chondrophila 71667 Bacteria Bacteria 43.5 0.00105   NR WP_211259953.1 71667 g86815 i0 52 0.837988826815642 50 24 83.8 0 6 155 14 63 WP_211259953.1 hypothetical protein, partial [Waddlia chondrophila] diamond 150 43.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae Waddlia Waddlia chondrophila
30781314 30781314 PRJNA835051_S_NODE_39594_length_232_cov_2.148148_g39298_i0 PRJNA835051 39594 232 2.148148 4.98370336 Phycisphaerae bacterium 2026778 Bacteria Bacteria 41.2 0.0497   NR HUX00694.1 2026778 g39298 i0 34 0.685344827586207 53 32 64.7 1 13 162 55 107 HUX00694.1 E2/UBC family protein [Phycisphaerae bacterium] diamond 159 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
30812876 30812876 PRJNA835051_S_NODE_122154_length_155_cov_1.705357_g121858_i0 PRJNA835051 122154 155 1.705357 2.64330335 Planctomycetota bacterium 2026780 Bacteria Bacteria 41.2 0.0401   NR HVG93258.1 2026780 g121858 i0 43.9 0.793548387096774 41 18 69.7 2 23 130 1141 1181 HVG93258.1 hypothetical protein [Planctomycetota bacterium] diamond 123 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30876098 30876098 PRJNA835051_S_NODE_14874_length_296_cov_3.521739_g14578_i0 PRJNA835051 14874 296 3.521739 10.42434744 Phycisphaerales bacterium 2052180 Bacteria Bacteria 44.7 0.0131   NR MDX9912115.1 2052180 g14578 i0 33.8 0.689189189189189 68 38 68.9 2 282 79 19 79 MDX9912115.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase [Phycisphaerales bacterium] diamond 204 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
31002577 31002577 PRJNA835051_S_NODE_77994_length_186_cov_2.615385_g77698_i0 PRJNA835051 77994 186 2.615385 4.8646161 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 41.6 0.0352   NR MBK8041134.1 2026800 g77698 i0 48.8 0.693548387096774 43 21 69.4 1 129 1 68 109 MBK8041134.1 YaeQ family protein [Verrucomicrobiaceae bacterium] diamond 129 41.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31666377 31666377 PRJNA835051_S_NODE_22397_length_269_cov_1.853982_g22101_i0 PRJNA835051 22397 269 1.853982 4.98721158 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 43.1 0.0353   NR MCB1101004.1 2212473 g22101 i0 42.9 0.62453531598513 56 28 62.5 1 210 43 32 83 MCB1101004.1 putative zinc-binding metallopeptidase [Kiritimatiellia bacterium] diamond 168 43.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31729679 31729679 PRJNA835051_S_NODE_27897_length_255_cov_1.122642_g27601_i0 PRJNA835051 27897 255 1.122642 2.8627371 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 43.5 0.0237   NR MAE62428.1 2026779 g27601 i0 38.2 0.647058823529412 55 30 60 1 79 231 35 89 MAE62428.1 hypothetical protein [Planctomycetaceae bacterium] diamond 165 43.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
32267752 32267752 PRJNA835051_S_NODE_108258_length_164_cov_0.958678_g107962_i0 PRJNA835051 108258 164 0.958678 1.57223192 Planctomycetes bacterium DG_23 1703414 Bacteria Bacteria 48.5 1.16e-4   NR KPJ62517.1 1703414 g107962 i0 50 0.98780487804878 54 26 97 1 162 4 475 528 KPJ62517.1 MAG: hypothetical protein AMS15_03585 [Planctomycetes bacterium DG_23] diamond 162 48.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium DG_23
32835737 32835737 PRJNA835051_S_NODE_84540_length_181_cov_1.369565_g84244_i0 PRJNA835051 84540 181 1.369565 2.47891265 Planctomycetota bacterium 2026780 Bacteria Bacteria 41.6 0.0426   NR TVR45921.1 2026780 g84244 i0 34.5 0.911602209944751 55 26 74.6 1 156 22 70 124 TVR45921.1 MAG: NADH-quinone oxidoreductase subunit M [Planctomycetota bacterium] diamond 165 41.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32898648 32898648 PRJNA835051_S_NODE_98940_length_170_cov_1.503937_g98644_i0 PRJNA835051 98940 170 1.503937 2.5566929 Lentisphaeria bacterium 2053569 Bacteria Bacteria 40.4 0.0464   NR MBR4956805.1 2053569 g98644 i0 42.2 0.794117647058823 45 21 79.4 1 161 27 81 120 MBR4956805.1 alanine racemase [Lentisphaeria bacterium] diamond 135 40.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;