RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA835051" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 5 ✖

bioproject 1

  • PRJNA835051 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13580045 13580045 PRJNA835051_S_NODE_75011_length_189_cov_1.630137_g74715_i0 PRJNA835051 75011 189 1.630137 3.08095893 Methanobrevibacter sp. 66852 Archaea Archaea 99 2.7900000000000003e-22   NR MBS7257934.1 66852 g74715 i0 71.2 2.9047619047619 59 17 93.7 0 11 187 532 590 MBS7257934.1 hypothetical protein [Methanobrevibacter sp.] diamond 549 99 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
26619955 26619955 PRJNA835051_S_NODE_83261_length_182_cov_1.359712_g82965_i0 PRJNA835051 83261 182 1.359712 2.47467584 root 1 Root_unresolved Root_unresolved 52 1.59e-6   NR MBR0370293.1 66852 g82965 i0 41.5 1.82967032967033 53 31 87.4 0 176 18 36 88 MBR0370293.1 single-stranded DNA-binding protein [Methanobrevibacter sp.] diamond 333 52 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
26833179 26833179 PRJNA835051_S_NODE_106541_length_165_cov_1.163934_g106245_i0 PRJNA835051 106541 165 1.163934 1.9204911 Methanobrevibacter sp. 66852 Archaea Archaea 110 3.65e-28   NR WP_329977078.1 66852 g106245 i0 96.3 0.981818181818182 54 2 98.2 0 2 163 106 159 WP_329977078.1 hypothetical protein, partial [Methanobrevibacter sp.] diamond 162 110 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30063014 30063014 PRJNA835051_S_NODE_12771_length_307_cov_2.344697_g12475_i0 PRJNA835051 12771 307 2.344697 7.19821979 root 1 Root_unresolved Root_unresolved 114 5.649999999999999e-31   NR MBQ2636984.1 66852 g12475 i0 78.1 2.48208469055375 64 14 62.5 0 305 114 7 70 MBQ2636984.1 hypothetical protein [Methanobrevibacter sp.] diamond 762 115 0.991304347826087 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31002569 31002569 PRJNA835051_S_NODE_27614_length_255_cov_2.839623_g27318_i0 PRJNA835051 27614 255 2.839623 7.24103865 Methanosphaera sp. 2666342 Archaea Archaea 79.3 1.71e-16   NR MBR3214339.1 2666342 g27318 i0 54.4 0.929411764705882 79 33 91.8 2 236 3 1 77 MBR3214339.1 hypothetical protein [Methanosphaera sp.] diamond 237 79.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;