RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA835051", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA835051 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29928447 29928447 PRJNA835051_S_NODE_64251_length_200_cov_1.089172_g63955_i0 PRJNA835051 64251 200 1.089172 2.178344 Fibrobacter sp. UWP2 1896216 Bacteria Bacteria 42.7 0.0215   NR WP_073188898.1 1896216 g63955 i0 43.2 0.66 44 25 66 0 199 68 448 491 WP_073188898.1 hypothetical protein [Fibrobacter sp. UWP2] diamond 132 42.7 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp. UWP2
31832995 31832995 PRJNA835051_S_NODE_82237_length_183_cov_1.028571_g81941_i0 PRJNA835051 82237 183 1.028571 1.88228493 Fibrobacter 832 Bacteria Bacteria 84 3.21e-17   NR NLG39703.1 35828 g81941 i0 75.4 2 61 14 98.4 1 182 3 26 86 NLG39703.1 carboxypeptidase regulatory-like domain-containing protein [Fibrobacter sp.] diamond 366 84 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;