RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA833575", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA833575 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28854508 28854508 PRJNA833575_P_NODE_35608_length_246_cov_2.254237_g35471_i0 PRJNA833575 35608 246 2.254237 5.54542302 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 55.8 6.1e-7   NR MES1912193.1 1215613 g35471 i0 47.2 0.878048780487805 72 38 87.8 0 31 246 6 77 MES1912193.1 60S ribosomal protein L7B [Cercozoa sp. M6MM] diamond 216 55.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31698107 31698107 PRJNA833575_P_NODE_41377_length_232_cov_0.883436_g41240_i0 PRJNA833575 41377 232 0.883436 2.04957152 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 73.9 3.25e-13   NR MES1909471.1 1215613 g41240 i0 46.2 1.00862068965517 78 41 99.6 1 231 1 280 357 MES1909471.1 hypothetical protein [Cercozoa sp. M6MM] diamond 234 73.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;