contig_metadata
7 rows where bioproject = "PRJNA833575", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5927688 | 5927688 | PRJNA833575_P_NODE_44045_length_229_cov_0.900000_g43908_i0 | PRJNA833575 | 44045 | 229 | 0.9 | 2.061 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 263 | 8.67e-66 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g43908 | i0 | 88 | 302.323144104803 | 225 | 23 | 97 | 4 | 1 | 222 | 2002112 | 2001889 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 69232 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 27875822 | 27875822 | PRJNA833575_P_NODE_26225_length_291_cov_0.972973_g26088_i0 | PRJNA833575 | 26225 | 291 | 0.972973 | 2.83135143 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 43.9 | 0.0235 | NR | QYK46985.1 | 2026777 | g26088 | i0 | 32.1 | 1.71134020618557 | 81 | 46 | 83.5 | 2 | 45 | 287 | 135 | 206 | QYK46985.1 MAG: isoprenylcysteine carboxylmethyltransferase family protein [Phycisphaeraceae bacterium] | diamond | 498 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 28484383 | 28484383 | PRJNA833575_P_NODE_38086_length_235_cov_1.457831_g37949_i0 | PRJNA833575 | 38086 | 235 | 1.457831 | 3.42590285 | Bremerella | 2714594 | Bacteria | Bacteria | 60.5 | 1.96e-8 | NR | WP_345091782.1 | 1031537 | g37949 | i0 | 36.6 | 2.97446808510638 | 71 | 45 | 90.6 | 0 | 213 | 1 | 550 | 620 | WP_345091782.1 beta strand repeat-containing protein [Bremerella cremea] | diamond | 699 | 60.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella cremea | |
| 29179107 | 29179107 | PRJNA833575_P_NODE_11809_length_421_cov_1.468750_g11672_i0 | PRJNA833575 | 11809 | 421 | 1.46875 | 6.1834375 | PVC group | 1783257 | Bacteria | Bacteria | 62.4 | 1.25e-8 | NR | HIA38721.1 | 2026780 | g11672 | i0 | 41 | 2.84323040380047 | 100 | 52 | 68.4 | 4 | 399 | 112 | 22 | 118 | HIA38721.1 hypothetical protein [Planctomycetota bacterium] | diamond | 1197 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29391565 | 29391565 | PRJNA833575_P_NODE_45789_length_227_cov_0.911392_g45652_i0 | PRJNA833575 | 45789 | 227 | 0.911392 | 2.06885984 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 52.4 | 9.88e-6 | NR | HEY3324418.1 | 2026780 | g45652 | i0 | 45.3 | 0.845814977973568 | 64 | 31 | 84.6 | 1 | 227 | 36 | 184 | 243 | HEY3324418.1 5'/3'-nucleotidase SurE [Planctomycetota bacterium] | diamond | 192 | 52.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29652181 | 29652181 | PRJNA833575_P_NODE_45850_length_227_cov_0.911392_g45713_i0 | PRJNA833575 | 45850 | 227 | 0.911392 | 2.06885984 | Botrimarina | 2795782 | Bacteria | Bacteria | 85.5 | 2.47e-17 | NR | MEN0111479.1 | 2026780 | g45713 | i0 | 61.8 | 4.91629955947137 | 76 | 19 | 91.2 | 2 | 221 | 15 | 5 | 77 | MEN0111479.1 aldehyde dehydrogenase family protein [Planctomycetota bacterium] | diamond | 1116 | 85.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32331243 | 32331243 | PRJNA833575_P_NODE_33179_length_257_cov_1.526596_g33042_i0 | PRJNA833575 | 33179 | 257 | 1.526596 | 3.92335172 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 64.7 | 6.51e-10 | NR | MEP0848575.1 | 2026778 | g33042 | i0 | 41.9 | 1.00389105058366 | 86 | 45 | 95.7 | 2 | 5 | 250 | 195 | 279 | MEP0848575.1 dienelactone hydrolase family protein [Phycisphaerae bacterium] | diamond | 258 | 64.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;