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contig_metadata

11 rows where bioproject = "PRJNA833575" and tax_clade = "PVC group"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 11 ✖

bioproject 1

  • PRJNA833575 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5927688 5927688 PRJNA833575_P_NODE_44045_length_229_cov_0.900000_g43908_i0 PRJNA833575 44045 229 0.9 2.061 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 263 8.67e-66   NTclustered gi|2874253853|emb|OY969909.1| 1914239 g43908 i0 88 302.323144104803 225 23 97 4 1 222 2002112 2001889 MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 blastn 69232 263 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
14852539 14852539 PRJNA833575_P_NODE_43472_length_229_cov_1.293750_g43335_i0 PRJNA833575 43472 229 1.29375 2.9626875 uncultured Chlamydiae bacterium 305355 Bacteria Bacteria 357 3.87e-94   NTclustered gi|2874254045|emb|OY970369.1| 305355 g43335 i0 94.76 102.807860262009 229 12 100 0 1 229 172098 171870 MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 blastn 23543 357 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       uncultured Chlamydiae bacterium
27875822 27875822 PRJNA833575_P_NODE_26225_length_291_cov_0.972973_g26088_i0 PRJNA833575 26225 291 0.972973 2.83135143 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 43.9 0.0235   NR QYK46985.1 2026777 g26088 i0 32.1 1.71134020618557 81 46 83.5 2 45 287 135 206 QYK46985.1 MAG: isoprenylcysteine carboxylmethyltransferase family protein [Phycisphaeraceae bacterium] diamond 498 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium
28484383 28484383 PRJNA833575_P_NODE_38086_length_235_cov_1.457831_g37949_i0 PRJNA833575 38086 235 1.457831 3.42590285 Bremerella 2714594 Bacteria Bacteria 60.5 1.96e-8   NR WP_345091782.1 1031537 g37949 i0 36.6 2.97446808510638 71 45 90.6 0 213 1 550 620 WP_345091782.1 beta strand repeat-containing protein [Bremerella cremea] diamond 699 60.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Bremerella Bremerella cremea
29179107 29179107 PRJNA833575_P_NODE_11809_length_421_cov_1.468750_g11672_i0 PRJNA833575 11809 421 1.46875 6.1834375 PVC group 1783257 Bacteria Bacteria 62.4 1.25e-8   NR HIA38721.1 2026780 g11672 i0 41 2.84323040380047 100 52 68.4 4 399 112 22 118 HIA38721.1 hypothetical protein [Planctomycetota bacterium] diamond 1197 62.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29391565 29391565 PRJNA833575_P_NODE_45789_length_227_cov_0.911392_g45652_i0 PRJNA833575 45789 227 0.911392 2.06885984 Planctomycetota bacterium 2026780 Bacteria Bacteria 52.4 9.88e-6   NR HEY3324418.1 2026780 g45652 i0 45.3 0.845814977973568 64 31 84.6 1 227 36 184 243 HEY3324418.1 5'/3'-nucleotidase SurE [Planctomycetota bacterium] diamond 192 52.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29652181 29652181 PRJNA833575_P_NODE_45850_length_227_cov_0.911392_g45713_i0 PRJNA833575 45850 227 0.911392 2.06885984 Botrimarina 2795782 Bacteria Bacteria 85.5 2.47e-17   NR MEN0111479.1 2026780 g45713 i0 61.8 4.91629955947137 76 19 91.2 2 221 15 5 77 MEN0111479.1 aldehyde dehydrogenase family protein [Planctomycetota bacterium] diamond 1116 85.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29959800 29959800 PRJNA833575_P_NODE_46571_length_226_cov_0.917197_g46434_i0 PRJNA833575 46571 226 0.917197 2.07286522 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.7 0.0278   NR MFH1460404.1 2035772 g46434 i0 43.4 0.70353982300885 53 29 69 1 207 52 190 242 MFH1460404.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 159 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30497063 30497063 PRJNA833575_P_NODE_32033_length_262_cov_1.575130_g31896_i0 PRJNA833575 32033 262 1.57513 4.1268406 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52.4 1.08e-5   NR MDB4349658.1 2035772 g31896 i0 35.6 0.99618320610687 87 52 95 2 252 4 101 187 MDB4349658.1 glutathione S-transferase [Candidatus Omnitrophota bacterium] diamond 261 52.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32331243 32331243 PRJNA833575_P_NODE_33179_length_257_cov_1.526596_g33042_i0 PRJNA833575 33179 257 1.526596 3.92335172 Phycisphaerae bacterium 2026778 Bacteria Bacteria 64.7 6.51e-10   NR MEP0848575.1 2026778 g33042 i0 41.9 1.00389105058366 86 45 95.7 2 5 250 195 279 MEP0848575.1 dienelactone hydrolase family protein [Phycisphaerae bacterium] diamond 258 64.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
32844216 32844216 PRJNA833575_P_NODE_42980_length_230_cov_0.894410_g42843_i0 PRJNA833575 42980 230 0.89441 2.057143 Pseudomonadati 3379134 Bacteria Bacteria 46.2 0.00183   NR MBN9693887.1 2026799 g42843 i0 38.4 2.80434782608696 73 42 95.2 1 226 8 114 183 MBN9693887.1 TCR/Tet family MFS transporter [Verrucomicrobiota bacterium] diamond 645 46.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;