RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA833575", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA833575 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26928058 26928058 PRJNA833575_P_NODE_35162_length_248_cov_2.379888_g35025_i0 PRJNA833575 35162 248 2.379888 5.90212224 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 136 5.24e-35   NR MCX6158809.1 2026749 g35025 i0 80.8 1.94758064516129 78 15 94.4 0 246 13 832 909 MCX6158809.1 pyruvate, phosphate dikinase [Ignavibacteriota bacterium] diamond 483 136 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
32331242 32331242 PRJNA833575_P_NODE_27459_length_284_cov_1.246512_g27322_i0 PRJNA833575 27459 284 1.246512 3.54009408 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 57.4 1.22e-7   NR NUN08821.1 2651163 g27322 i0 42.2 0.876760563380282 83 40 87.7 4 260 12 98 172 NUN08821.1 lipocalin family protein [Ignavibacteriaceae bacterium] diamond 249 57.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
32457602 32457602 PRJNA833575_P_NODE_44599_length_228_cov_0.905660_g44462_i0 PRJNA833575 44599 228 0.90566 2.0649048 Ignavibacteria bacterium 2053306 Bacteria Bacteria 58.5 6.25e-8   NR MCU7494055.1 2053306 g44462 i0 48.4 3.32894736842105 62 32 81.6 0 186 1 192 253 MCU7494055.1 ankyrin repeat domain-containing protein [Ignavibacteria bacterium] diamond 759 58.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;