RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA832865", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA832865 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29296692 29296692 PRJNA832865_S_NODE_107709_length_243_cov_0.905882_g102623_i0 PRJNA832865 107709 243 0.905882 2.20129326 Thermoplasmata archaeon 1906666 Archaea Archaea 43.9 0.0129   NR RLF48892.1 1906666 g102623 i0 38.9 0.666666666666667 54 33 66.7 0 172 11 27 80 RLF48892.1 MAG: NAD-dependent protein deacylase [Thermoplasmata archaeon] diamond 162 43.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31034350 31034350 PRJNA832865_S_NODE_55155_length_337_cov_2.435606_g50069_i0 PRJNA832865 55155 337 2.435606 8.20799222 Thermoplasmatota archaeon 2806419 Archaea Archaea 44.7 0.0158   NR MDI6707611.1 2806419 g50069 i0 29.1 0.916913946587537 103 57 91.7 3 322 14 107 193 MDI6707611.1 hypothetical protein [Thermoplasmatota archaeon] diamond 309 44.7 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;