RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA832865" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA832865 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
822985 822985 PRJNA832865_S_NODE_34021_length_479_cov_1.219212_g28941_i0 PRJNA832865 34021 479 1.219212 5.84002548 Phycomyces blakesleeanus 4837 Fungi Fungi 52.8 0.047   NTclustered gi|1069943474|ref|XM_018440677.1| 763407 g28941 i0 100 0.058455114822547 28 0 6 0 102 129 1342 1315 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
3373959 3373959 PRJNA832865_S_NODE_43803_length_392_cov_1.962382_g38717_i0 PRJNA832865 43803 392 1.962382 7.69253744 Lobosporangium transversale 64571 Fungi Fungi 52.8 0.037   NTclustered gi|1227149312|ref|XM_022019954.1| 64571 g38717 i0 100 0.0714285714285714 28 0 7 0 253 280 1386 1413 Lobosporangium transversale hypothetical protein (BCR41DRAFT_209947), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
23774604 23774604 PRJNA832865_S_NODE_110759_length_241_cov_0.916667_g105673_i0 PRJNA832865 110759 241 0.916667 2.20916747 Rhizomucor pusillus 4840 Fungi Fungi 126 1.26e-24   NTclustered gi|2837753634|ref|XM_069381467.1| 4840 g105673 i0 84.375 6.31120331950207 128 20 53 0 39 166 574 701 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_2950), partial mRNA blastn 1521 126 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
23775754 23775754 PRJNA832865_S_NODE_54879_length_338_cov_3.154717_g49793_i0 PRJNA832865 54879 338 3.154717 10.66294346 Rhizophagus irregularis 588596 Fungi Fungi 56.5 0.002   NTclustered gi|2749791574|ref|XM_025327744.2| 588596 g49793 i0 100 0.20414201183432 30 0 9 0 95 124 1711 1740 Rhizophagus irregularis uncharacterized protein (OCT59_028753), partial mRNA blastn 69 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
28002326 28002326 PRJNA832865_S_NODE_17085_length_922_cov_3.654888_g12821_i0 PRJNA832865 17085 922 3.654888 33.69806736 Rhizopus arrhizus 64495 Fungi Fungi 53.5 7.37e-4   NR KAG1136540.1 64495 g12821 i0 39.4 0.231019522776573 71 42 23.1 1 329 117 208 277 KAG1136540.1 hypothetical protein G6F38_011974 [Rhizopus arrhizus] diamond 213 53.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
28863080 28863080 PRJNA832865_S_NODE_34748_length_470_cov_2.068010_g29667_i0 PRJNA832865 34748 470 2.06801 9.719647 Glomeromycetes 214506 Fungi Fungi 52.8 3.94e-5   NR GBB86912.1 94130 g29667 i0 39 5.8531914893617 77 42 48.5 3 6 233 74 146 GBB86912.1 hypothetical protein RclHR1_13360009 [Rhizophagus clarus] diamond 2751 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus clarus
29715400 29715400 PRJNA832865_S_NODE_108750_length_242_cov_0.911243_g103664_i0 PRJNA832865 108750 242 0.911243 2.20520806 Entrophospora 27375 Fungi Fungi 68.9 2.18e-11   NR CAG8556911.1 984092 g103664 i0 43.8 2.97520661157025 80 45 99.2 0 241 2 141 220 CAG8556911.1 13506_t:CDS:10 [Entrophospora candida] diamond 720 68.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae Entrophospora Entrophospora candida
30497027 30497027 PRJNA832865_S_NODE_102193_length_246_cov_0.890173_g97107_i0 PRJNA832865 102193 246 0.890173 2.18982558 Mucor saturninus 64648 Fungi Fungi 58.2 6e-8   NR KAG2202734.1 64648 g97107 i0 43.9 1 82 39 97.6 3 241 2 64 140 KAG2202734.1 hypothetical protein INT47_004758 [Mucor saturninus] diamond 246 58.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor saturninus
30600131 30600131 PRJNA832865_S_NODE_34573_length_472_cov_2.328321_g29492_i0 PRJNA832865 34573 472 2.328321 10.98967512 Fungi 4751 Fungi Fungi 51.2 4.26e-4   NR CAG8458314.1 160502 g29492 i0 29.2 1.74152542372881 130 87 79.4 3 418 44 268 397 CAG8458314.1 18858_t:CDS:2 [Racocetra persica] diamond 822 51.6 0.992248062015504 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Racocetra Racocetra persica
32267709 32267709 PRJNA832865_S_NODE_25058_length_631_cov_3.682796_g20099_i0 PRJNA832865 25058 631 3.682796 23.23844276 Rhizopus arrhizus 64495 Fungi Fungi 53.5 2.07e-4   NR KAG1136540.1 64495 g20099 i0 39.4 0.832012678288431 71 42 33.8 1 303 515 208 277 KAG1136540.1 hypothetical protein G6F38_011974 [Rhizopus arrhizus] diamond 525 53.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
32529459 32529459 PRJNA832865_S_NODE_111199_length_241_cov_0.916667_g106113_i0 PRJNA832865 111199 241 0.916667 2.20916747 Ambispora 453566 Fungi Fungi 103 1.2699999999999999e-23   NR CAG8566702.1 144530 g106113 i0 67.7 3.24896265560166 65 21 80.9 0 241 47 456 520 CAG8566702.1 3551_t:CDS:10 [Ambispora gerdemannii] diamond 783 103 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Ambisporaceae Ambispora Ambispora gerdemannii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;