RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA832865", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA832865 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16125014 16125014 PRJNA832865_S_NODE_1593_length_3898_cov_9.992680_g1075_i0 PRJNA832865 1593 3898 9.99268 389.5146664 brine shrimp toti-like virus 1 2900477 Viruses Viruses 951 0   NR UNI73990.1 2900477 g1075 i0 57.8 1.31913801949718 857 340 65.4 5 3 2552 3 844 UNI73990.1 MAG: capsid protein [brine shrimp toti-like virus 1] diamond 5142 951 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   brine shrimp toti-like virus 1
29422743 29422743 PRJNA832865_S_NODE_27749_length_573_cov_1.596000_g22723_i0 PRJNA832865 27749 573 1.596 9.14508 Totiviridae sp. 1955172 Viruses Viruses 68.2 1.58e-9   NR WAK77673.1 1955172 g22723 i0 29.9 0.910994764397906 174 107 89.5 6 536 24 889 1050 WAK77673.1 MAG: hypothetical protein [Totiviridae sp.] diamond 522 68.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
32772672 32772672 PRJNA832865_S_NODE_14660_length_1069_cov_3.586345_g10836_i0 PRJNA832865 14660 1069 3.586345 38.33802805 Totiviridae sp. 1955172 Viruses Viruses 50.1 0.0136   NR WAK77302.1 1955172 g10836 i0 23.8 1.74275023386342 206 146 55.6 5 61 654 245 447 WAK77302.1 MAG: hypothetical protein [Totiviridae sp.] diamond 1863 50.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;