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contig_metadata

30 rows where bioproject = "PRJNA832865", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 30 ✖

tax_kingdom 1

  • Metazoa · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA832865 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4652106 4652106 PRJNA832865_S_NODE_79904_length_275_cov_0.925743_g74818_i0 PRJNA832865 79904 275 0.925743 2.54579325 Caenorhabditis elegans 6239 Nematoda Nematoda 54.7 0.007   NTclustered gi|687865919|emb|LK927926.1| 6239 g74818 i0 96.97 0.24 33 0 12 1 122 153 8194 8162 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000341 blastn 66 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
7201680 7201680 PRJNA832865_S_NODE_60806_length_319_cov_1.243902_g55720_i0 PRJNA832865 60806 319 1.243902 3.96804738 Caenorhabditis elegans 6239 Nematoda Nematoda 58.4 6.43e-4   NTclustered gi|687865720|emb|LK927684.1| 6239 g55720 i0 92.5 0.250783699059561 40 3 13 0 104 143 60373 60412 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000135 blastn 80 58.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
9751409 9751409 PRJNA832865_S_NODE_56508_length_333_cov_0.923077_g51422_i0 PRJNA832865 56508 333 0.923077 3.07384641 Parastrongyloides trichosuri 131310 Nematoda Nematoda 60.2 1.88e-4   NTclustered gi|959095881|ref|NC_028620.1| 131310 g51422 i0 81.579 0.228228228228228 76 10 22 4 91 163 8812 8886 Parastrongyloides trichosuri mitochondrial DNA, complete genome, isolate: KNP blastn 76 60.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Parastrongyloides Parastrongyloides trichosuri
13577058 13577058 PRJNA832865_S_NODE_6631_length_1966_cov_29.434760_g4740_i0 PRJNA832865 6631 1966 29.43476 578.6873816 Metazoa 33208 Nematoda Nematoda 163 3.6199999999999985e-43   NR OUC39896.1 6335 g4740 i0 90.1 16.4359104781282 81 8 12.4 0 1297 1055 82 162 OUC39896.1 ubiquitin--protein ligase [Trichinella nativa] diamond 32313 164 0.99390243902439 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nativa
17401847 17401847 PRJNA832865_S_NODE_67534_length_301_cov_0.938596_g62448_i0 PRJNA832865 67534 301 0.938596 2.82517396 Caenorhabditis elegans 6239 Nematoda Nematoda 56.5 0.002   NTclustered gi|687866076|emb|LK928113.1| 6239 g62448 i0 96.97 0.312292358803987 33 1 11 0 194 226 12378 12346 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_contig0000106 blastn 94 56.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
25049627 25049627 PRJNA832865_S_NODE_53440_length_344_cov_1.354244_g48354_i0 PRJNA832865 53440 344 1.354244 4.65859936 Caenorhabditis briggsae 6238 Nematoda Nematoda 52.8 0.033   NTclustered gi|11094947|gb|AC084497.1|CBRG11J16 6238 g48354 i0 100 0.0813953488372093 28 0 8 0 180 207 14928 14901 Caenorhabditis briggsae cosmid G11J16, complete sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
26642900 26642900 PRJNA832865_S_NODE_112901_length_230_cov_2.292994_g107815_i0 PRJNA832865 112901 230 2.292994 5.2738862 Trichuris suis 68888 Nematoda Nematoda 80.9 6.81e-16   NR KFD55864.1 68888 g107815 i0 58.3 3.1304347826087 60 25 78.3 0 193 14 138 197 KFD55864.1 hypothetical protein M513_03303 [Trichuris suis] diamond 720 80.9 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
26642915 26642915 PRJNA832865_S_NODE_54921_length_338_cov_2.128302_g49835_i0 PRJNA832865 54921 338 2.128302 7.19366076 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 77.8 4.93e-14   NR CAD5225504.1 465554 g49835 i0 37.9 2.64497041420118 124 38 75.4 2 68 322 307 430 CAD5225504.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 894 77.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
27086287 27086287 PRJNA832865_S_NODE_84062_length_267_cov_1.190722_g78976_i0 PRJNA832865 84062 267 1.190722 3.17922774 Mesorhabditis belari 2138241 Nematoda Nematoda 43.5 0.0169   NR CAJ0922360.1 2138241 g78976 i0 38.8 4.62921348314607 67 36 73 2 36 230 101 164 CAJ0922360.1 unnamed protein product, partial [Mesorhabditis belari] diamond 1236 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
27212460 27212460 PRJNA832865_S_NODE_92482_length_253_cov_1.711111_g87396_i0 PRJNA832865 92482 253 1.711111 4.32911083 Acanthocheilonema viteae 6277 Nematoda Nematoda 42.7 0.0426   NR VBB35221.1 6277 g87396 i0 37.7 0.723320158102767 61 30 72.3 2 222 40 400 452 VBB35221.1 unnamed protein product, partial [Acanthocheilonema viteae] diamond 183 42.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
27316204 27316204 PRJNA832865_S_NODE_106703_length_243_cov_1.358824_g101617_i0 PRJNA832865 106703 243 1.358824 3.30194232 root 1 Root_unresolved Root_unresolved 71.2 3.43e-12   NR XP_045096598.1 6238 g101617 i0 43.8 5.5679012345679 73 41 90.1 0 4 222 262 334 XP_045096598.1 Protein CBG18874 [Caenorhabditis briggsae] diamond 1353 71.6 0.994413407821229 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
27465554 27465554 PRJNA832865_S_NODE_39783_length_421_cov_2.471264_g34698_i0 PRJNA832865 39783 421 2.471264 10.40402144 Ancylostoma ceylanicum 53326 Nematoda Nematoda 49.3 0.00113   NR EYB89951.1 53326 g34698 i0 71 0.220902612826603 31 9 22.1 0 177 269 207 237 EYB89951.1 hypothetical protein Y032_0225g2753 [Ancylostoma ceylanicum] diamond 93 49.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
27559937 27559937 PRJNA832865_S_NODE_109124_length_242_cov_0.911243_g104038_i0 PRJNA832865 109124 242 0.911243 2.20520806 Dracunculus medinensis 318479 Nematoda Nematoda 41.2 0.0329   NR VDN59110.1 318479 g104038 i0 40 1.26446280991736 60 24 69.4 2 9 176 44 95 VDN59110.1 unnamed protein product [Dracunculus medinensis] diamond 306 41.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
27718393 27718393 PRJNA832865_S_NODE_40344_length_417_cov_0.895349_g35259_i0 PRJNA832865 40344 417 0.895349 3.73360533 Haemonchus contortus 6289 Nematoda Nematoda 43.9 0.0457   NR XGW31960.1 6289 g35259 i0 29.9 0.964028776978417 67 36 40.3 1 231 398 31 97 XGW31960.1 hypothetical protein V3C99_010270 [Haemonchus contortus] diamond 402 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
27781272 27781272 PRJNA832865_S_NODE_77624_length_279_cov_1.121359_g72538_i0 PRJNA832865 77624 279 1.121359 3.12859161 Necator americanus 51031 Nematoda Nematoda 48.1 1.93e-4   NR XP_064060264.1 51031 g72538 i0 37.7 0.827956989247312 77 38 72 2 207 7 4 80 XP_064060264.1 hypothetical protein RB195_014222 [Necator americanus] diamond 231 48.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
27821437 27821437 PRJNA832865_S_NODE_52524_length_348_cov_0.949091_g47438_i0 PRJNA832865 52524 348 0.949091 3.30283668 Trichinella 6333 Nematoda Nematoda 71.2 9.54e-12   NR KRY40850.1 6334 g47438 i0 38.9 8.37931034482759 108 65 92.2 1 5 325 216 323 KRY40850.1 hypothetical protein T01_9772, partial [Trichinella spiralis] diamond 2916 71.2 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
28412717 28412717 PRJNA832865_S_NODE_94186_length_251_cov_1.230337_g89100_i0 PRJNA832865 94186 251 1.230337 3.08814587 Auanema sp. JU1783 2878363 Nematoda Nematoda 114 4.74e-28   NR CAI4226329.1 2878363 g89100 i0 63 3.29880478087649 92 25 99.2 2 2 250 131 222 CAI4226329.1 unnamed protein product [Auanema sp. JU1783] diamond 828 114 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
28926286 28926286 PRJNA832865_S_NODE_109388_length_242_cov_0.911243_g104302_i0 PRJNA832865 109388 242 0.911243 2.20520806 Trichuris 36086 Nematoda Nematoda 53.5 5.64e-6   NR CDW51891.1 36087 g104302 i0 53.5 1.59917355371901 43 20 53.3 0 103 231 189 231 CDW51891.1 Pkinase Tyr domain containing protein [Trichuris trichiura] diamond 387 53.5 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
28958143 28958143 PRJNA832865_S_NODE_83008_length_269_cov_1.178571_g77922_i0 PRJNA832865 83008 269 1.178571 3.17035599 Metazoa 33208 Nematoda Nematoda 89.7 8.95e-21   NR XP_045097316.1 6238 g77922 i0 57.7 20.6988847583643 71 30 79.2 0 30 242 1 71 XP_045097316.1 Protein CBG21481 [Caenorhabditis briggsae] diamond 5568 89.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
29075843 29075843 PRJNA832865_S_NODE_39628_length_423_cov_0.948571_g34543_i0 PRJNA832865 39628 423 0.948571 4.01245533 Ditylenchus destructor 166010 Nematoda Nematoda 53.9 3.05e-5   NR KAI1702103.1 166010 g34543 i0 34.2 0.517730496453901 73 48 51.8 0 227 9 296 368 KAI1702103.1 transthyretin-like family domain-containing protein [Ditylenchus destructor] diamond 219 53.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
29399918 29399918 PRJNA832865_S_NODE_17869_length_883_cov_3.704938_g13475_i0 PRJNA832865 17869 883 3.704938 32.71460254 Opisthokonta 33154 Nematoda Nematoda 45.1 0.0425   NR VIP00180.1 6279 g13475 i0 43.8 0.546998867497169 64 33 21.1 2 468 653 32 94 VIP00180.1 Uncharacterized protein BM_BM17156 [Brugia malayi] diamond 483 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia malayi
29485894 29485894 PRJNA832865_S_NODE_34750_length_470_cov_1.944584_g29669_i0 PRJNA832865 34750 470 1.944584 9.1395448 Trichuris suis 68888 Nematoda Nematoda 73.6 4.95e-12   NR KFD55864.1 68888 g29669 i0 54.5 1.67872340425532 66 27 40.2 2 190 2 148 213 KFD55864.1 hypothetical protein M513_03303 [Trichuris suis] diamond 789 73.6 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
29549102 29549102 PRJNA832865_S_NODE_56410_length_333_cov_1.473077_g51324_i0 PRJNA832865 56410 333 1.473077 4.90534641 Trichuris suis 68888 Nematoda Nematoda 47.4 0.00198   NR KFD47104.1 68888 g51324 i0 40.7 0.486486486486487 54 31 47.7 1 323 165 158 211 KFD47104.1 hypothetical protein M513_12014 [Trichuris suis] diamond 162 47.4 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
29936843 29936843 PRJNA832865_S_NODE_108231_length_242_cov_1.639053_g103145_i0 PRJNA832865 108231 242 1.639053 3.96650826 root 1 Root_unresolved Root_unresolved 45.4 0.0042   NR EFO95251.1 31234 g103145 i0 45.2 6.27272727272727 62 33 75.6 1 56 238 888 949 EFO95251.1 hypothetical protein CRE_08695 [Caenorhabditis remanei] diamond 1518 45.8 0.991266375545852 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
30876083 30876083 PRJNA832865_S_NODE_93034_length_252_cov_2.759777_g87948_i0 PRJNA832865 93034 252 2.759777 6.95463804 Steinernema hermaphroditum 289476 Nematoda Nematoda 49.7 1.47e-4   NR KAK0420877.1 289476 g87948 i0 37.3 2.72619047619048 83 41 85.7 2 12 227 412 494 KAK0420877.1 hypothetical protein QR680_014941 [Steinernema hermaphroditum] diamond 687 49.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema hermaphroditum
31295407 31295407 PRJNA832865_S_NODE_108395_length_242_cov_1.366864_g103309_i0 PRJNA832865 108395 242 1.366864 3.30781088 Metazoa 33208 Nematoda Nematoda 52.8 1.08e-5   NR EFO87561.1 31234 g103309 i0 66.7 3.76859504132231 33 11 40.9 0 195 97 720 752 EFO87561.1 hypothetical protein CRE_05388 [Caenorhabditis remanei] diamond 912 53.1 0.994350282485876 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
32204295 32204295 PRJNA832865_S_NODE_48738_length_365_cov_0.914384_g43652_i0 PRJNA832865 48738 365 0.914384 3.3375016 Trichinella nelsoni 6336 Nematoda Nematoda 58.9 2.68e-7   NR KRX28105.1 6336 g43652 i0 34.7 0.96986301369863 118 75 97 1 355 2 74 189 KRX28105.1 hypothetical protein T07_5984 [Trichinella nelsoni] diamond 354 58.9 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nelsoni
32552620 32552620 PRJNA832865_S_NODE_18539_length_853_cov_1.787179_g14047_i0 PRJNA832865 18539 853 1.787179 15.24463687 Strongyloides ratti 34506 Nematoda Nematoda 55.5 1.57e-4   NR XP_024504236.1 34506 g14047 i0 66.7 0.256740914419695 33 11 11.6 0 22 120 522 554 XP_024504236.1 Serine/threonine-protein kinase/endoribonuclease IRE1 [Strongyloides ratti] diamond 219 55.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
32678073 32678073 PRJNA832865_S_NODE_28280_length_563_cov_1.620408_g23249_i0 PRJNA832865 28280 563 1.620408 9.12289704 Dracunculus medinensis 318479 Nematoda Nematoda 54.7 1.31e-5   NR VDN53920.1 318479 g23249 i0 44.9 1.62522202486679 49 27 26.1 0 558 412 115 163 VDN53920.1 unnamed protein product [Dracunculus medinensis] diamond 915 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
32709755 32709755 PRJNA832865_S_NODE_65080_length_307_cov_1.290598_g59994_i0 PRJNA832865 65080 307 1.290598 3.96213586 Steinernema carpocapsae 34508 Nematoda Nematoda 46.6 0.0036   NR TKR62401.1 34508 g59994 i0 38.9 1.05537459283388 54 32 51.8 1 7 165 916 969 TKR62401.1 hypothetical protein L596_026374 [Steinernema carpocapsae] diamond 324 46.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;