contig_metadata
20 rows where bioproject = "PRJNA832865" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 823800 | 823800 | PRJNA832865_S_NODE_82421_length_270_cov_1.253807_g77335_i0 | PRJNA832865 | 82421 | 270 | 1.253807 | 3.3852789 | Candidatus Chlamydia sanziniae | 1806891 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1033686309|gb|CP014639.1| | 1806891 | g77335 | i0 | 100 | 0.103703703703704 | 28 | 0 | 10 | 0 | 190 | 217 | 654917 | 654944 | Candidatus Chlamydia sanziniae strain 2742-308 chromosome | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Candidatus Chlamydia sanziniae | |
| 3372959 | 3372959 | PRJNA832865_S_NODE_10423_length_1428_cov_8.787454_g7545_i0 | PRJNA832865 | 10423 | 1428 | 8.787454 | 125.48484312 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 56.5 | 0.011 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g7545 | i0 | 100 | 0.061624649859944 | 30 | 0 | 2 | 0 | 54 | 83 | 1852363 | 1852334 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 88 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 27022931 | 27022931 | PRJNA832865_S_NODE_14642_length_1070_cov_30.954865_g8286_i2 | PRJNA832865 | 14642 | 1070 | 30.954865 | 331.2170555 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 81.3 | 5.93e-14 | NR | MFH0952965.1 | 2026799 | g8286 | i2 | 42.4 | 0.698130841121495 | 85 | 48 | 23.8 | 1 | 708 | 454 | 118 | 201 | MFH0952965.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Verrucomicrobiota bacterium] | diamond | 747 | 81.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27180792 | 27180792 | PRJNA832865_S_NODE_49482_length_361_cov_1.829861_g44396_i0 | PRJNA832865 | 49482 | 361 | 1.829861 | 6.60579821 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 48.5 | 0.00133 | NR | HEU5068864.1 | 2499141 | g44396 | i0 | 37.7 | 0.506925207756233 | 61 | 29 | 44 | 3 | 229 | 71 | 517 | 576 | HEU5068864.1 MFS transporter [Verrucomicrobiia bacterium] | diamond | 183 | 48.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27180810 | 27180810 | PRJNA832865_S_NODE_87762_length_261_cov_0.819149_g82676_i0 | PRJNA832865 | 87762 | 261 | 0.819149 | 2.13797889 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 68.9 | 4.24e-12 | NR | MBT3191068.1 | 2026799 | g82676 | i0 | 38.4 | 8.45977011494253 | 86 | 52 | 98.9 | 1 | 259 | 2 | 101 | 185 | MBT3191068.1 ATP-dependent Clp protease proteolytic subunit [Verrucomicrobiota bacterium] | diamond | 2208 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27339206 | 27339206 | PRJNA832865_S_NODE_64763_length_308_cov_1.072340_g59677_i0 | PRJNA832865 | 64763 | 308 | 1.07234 | 3.3028072 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 43.9 | 0.0288 | NR | MEX0741905.1 | 2026777 | g59677 | i0 | 32.4 | 0.720779220779221 | 74 | 48 | 72.1 | 1 | 280 | 59 | 7 | 78 | MEX0741905.1 carbon-nitrogen hydrolase family protein [Phycisphaeraceae bacterium] | diamond | 222 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 27718383 | 27718383 | PRJNA832865_S_NODE_11364_length_1334_cov_34.475813_g8286_i0 | PRJNA832865 | 11364 | 1334 | 34.475813 | 459.90734542 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 99.4 | 4.32e-20 | NR | MFH0952965.1 | 2026799 | g8286 | i0 | 44.4 | 0.22263868065967 | 99 | 54 | 22.3 | 1 | 585 | 881 | 104 | 201 | MFH0952965.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Verrucomicrobiota bacterium] | diamond | 297 | 99.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27939118 | 27939118 | PRJNA832865_S_NODE_35405_length_463_cov_1.753846_g30323_i0 | PRJNA832865 | 35405 | 463 | 1.753846 | 8.12030698 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 68.9 | 3.35e-11 | NR | HET6328477.1 | 2026779 | g30323 | i0 | 31.4 | 0.764578833693304 | 118 | 74 | 75.2 | 3 | 94 | 441 | 36 | 148 | HET6328477.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 354 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 28010932 | 28010932 | PRJNA832865_S_NODE_11365_length_1334_cov_29.375099_g8286_i1 | PRJNA832865 | 11365 | 1334 | 29.375099 | 391.86382066 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 89.7 | 8.39e-17 | NR | HLX63275.1 | 2026780 | g8286 | i1 | 46.2 | 1.47976011994003 | 93 | 49 | 20.9 | 1 | 585 | 863 | 99 | 190 | HLX63275.1 ATP-dependent Clp protease proteolytic subunit [Planctomycetota bacterium] | diamond | 1974 | 89.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28507436 | 28507436 | PRJNA832865_S_NODE_76627_length_281_cov_1.120192_g71541_i0 | PRJNA832865 | 76627 | 281 | 1.120192 | 3.14773952 | Aquisphaera insulae | 2712864 | Bacteria | Bacteria | 42 | 0.0443 | NR | WP_165228110.1 | 2712864 | g71541 | i0 | 31.6 | 0.843416370106762 | 79 | 53 | 84.3 | 1 | 21 | 257 | 6 | 83 | WP_165228110.1 hypothetical protein [Aquisphaera insulae] | diamond | 237 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera insulae | |
| 28822831 | 28822831 | PRJNA832865_S_NODE_83828_length_267_cov_1.907216_g78742_i0 | PRJNA832865 | 83828 | 267 | 1.907216 | 5.09226672 | Candidatus Scalindua sp. | 2268189 | Bacteria | Bacteria | 43.1 | 0.0332 | NR | MCP4254340.1 | 2268189 | g78742 | i0 | 30 | 0.898876404494382 | 80 | 44 | 76.4 | 3 | 208 | 5 | 56 | 135 | MCP4254340.1 hypothetical protein [Candidatus Scalindua sp.] | diamond | 240 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Scalinduaceae | Candidatus Scalindua | Candidatus Scalindua sp. | |
| 28917549 | 28917549 | PRJNA832865_S_NODE_106968_length_243_cov_0.941176_g101882_i0 | PRJNA832865 | 106968 | 243 | 0.941176 | 2.28705768 | Planctomycetia bacterium | 2052181 | Bacteria | Bacteria | 43.5 | 0.0204 | NR | MDO5554654.1 | 2052181 | g101882 | i0 | 35.2 | 0.666666666666667 | 54 | 35 | 66.7 | 0 | 28 | 189 | 375 | 428 | MDO5554654.1 glycoside hydrolase family 97 N-terminal domain-containing protein [Planctomycetia bacterium] | diamond | 162 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 30117657 | 30117657 | PRJNA832865_S_NODE_47472_length_371_cov_1.419463_g42386_i0 | PRJNA832865 | 47472 | 371 | 1.419463 | 5.26620773 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 44.3 | 0.0403 | NR | MEL0005672.1 | 2026772 | g42386 | i0 | 44.1 | 0.549865229110512 | 68 | 32 | 51.8 | 4 | 300 | 109 | 111 | 176 | MEL0005672.1 substrate-binding domain-containing protein [Opitutales bacterium] | diamond | 204 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 30276041 | 30276041 | PRJNA832865_S_NODE_37712_length_439_cov_1.756831_g32627_i0 | PRJNA832865 | 37712 | 439 | 1.756831 | 7.71248809 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 80.5 | 9.36e-15 | NR | HEY3226600.1 | 2026780 | g32627 | i0 | 45.1 | 6.10250569476082 | 102 | 46 | 68.3 | 3 | 8 | 307 | 165 | 258 | HEY3226600.1 serine/threonine-protein kinase [Planctomycetota bacterium] | diamond | 2679 | 80.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31065881 | 31065881 | PRJNA832865_S_NODE_64655_length_308_cov_1.348936_g59569_i0 | PRJNA832865 | 64655 | 308 | 1.348936 | 4.15472288 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 90.5 | 1.27e-18 | NR | MCG8432081.1 | 2035772 | g59569 | i0 | 41 | 10.5194805194805 | 100 | 59 | 97.4 | 0 | 307 | 8 | 138 | 237 | MCG8432081.1 reverse transcriptase family protein [Candidatus Omnitrophota bacterium] | diamond | 3240 | 90.5 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 32014441 | 32014441 | PRJNA832865_S_NODE_73938_length_286_cov_2.276995_g68852_i0 | PRJNA832865 | 73938 | 286 | 2.276995 | 6.5122057 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 43.1 | 0.0388 | NR | MDX1963016.1 | 2715253 | g68852 | i0 | 34.8 | 0.723776223776224 | 69 | 41 | 68.2 | 2 | 75 | 269 | 115 | 183 | MDX1963016.1 hypothetical protein [Pirellulales bacterium] | diamond | 207 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 32046178 | 32046178 | PRJNA832865_S_NODE_80198_length_274_cov_1.452736_g75112_i0 | PRJNA832865 | 80198 | 274 | 1.452736 | 3.98049664 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 42.7 | 0.0472 | NR | MBE6399572.1 | 1932692 | g75112 | i0 | 42.9 | 0.45985401459854 | 42 | 23 | 44.9 | 1 | 206 | 84 | 193 | 234 | MBE6399572.1 FtsQ-type POTRA domain-containing protein [Lentisphaerota bacterium] | diamond | 126 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 32109382 | 32109382 | PRJNA832865_S_NODE_74198_length_286_cov_1.112676_g69112_i0 | PRJNA832865 | 74198 | 286 | 1.112676 | 3.18225336 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 42.7 | 0.0257 | NR | MEI6535485.1 | 2026800 | g69112 | i0 | 38.2 | 0.576923076923077 | 55 | 32 | 57.7 | 1 | 237 | 73 | 21 | 73 | MEI6535485.1 hypothetical protein [Verrucomicrobiaceae bacterium] | diamond | 165 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32457566 | 32457566 | PRJNA832865_S_NODE_104279_length_245_cov_0.895349_g99193_i0 | PRJNA832865 | 104279 | 245 | 0.895349 | 2.19360505 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 60.5 | 1.59e-8 | NR | MBV8129076.1 | 2026779 | g99193 | i0 | 66.7 | 0.514285714285714 | 42 | 14 | 51.4 | 0 | 118 | 243 | 1 | 42 | MBV8129076.1 ABC transporter permease [Planctomycetaceae bacterium] | diamond | 126 | 60.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 32457583 | 32457583 | PRJNA832865_S_NODE_34699_length_471_cov_1.092965_g29618_i0 | PRJNA832865 | 34699 | 471 | 1.092965 | 5.14786515 | Candidatus Scalindua sp. | 2268189 | Bacteria | Bacteria | 145 | 4.359999999999999e-37 | NR | MCP4255696.1 | 2268189 | g29618 | i0 | 44.9 | 1.72611464968153 | 158 | 81 | 96.8 | 1 | 1 | 456 | 627 | 784 | MCP4255696.1 hypothetical protein [Candidatus Scalindua sp.] | diamond | 813 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Scalinduaceae | Candidatus Scalindua | Candidatus Scalindua sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;