RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA832865", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA832865 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28822790 28822790 PRJNA832865_S_NODE_105028_length_244_cov_1.350877_g99942_i0 PRJNA832865 105028 244 1.350877 3.29613988 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 43.1 0.0083   NR MDO4684522.1 2026720 g99942 i0 39 0.725409836065574 59 32 67.6 1 73 237 42 100 MDO4684522.1 preprotein translocase subunit SecE [Candidatus Saccharibacteria bacterium] diamond 177 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32584042 32584042 PRJNA832865_S_NODE_109299_length_242_cov_0.911243_g104213_i0 PRJNA832865 109299 242 0.911243 2.20520806 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 59.3 4.03e-8   NR MCA9346951.1 2026720 g104213 i0 35.7 1.67355371900826 70 45 86.8 0 3 212 38 107 MCA9346951.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 405 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;