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contig_metadata

8 rows where bioproject = "PRJNA832865" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA832865 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26706138 26706138 PRJNA832865_S_NODE_94861_length_251_cov_0.865169_g89775_i0 PRJNA832865 94861 251 0.865169 2.17157419 Candidatus Schekmanbacteria bacterium RIFCSPHIGHO2_ 2419984 Bacteria Bacteria 44.3 0.0113   NR OGL54972.1 1817881 g89775 i0 34.5 0.693227091633466 58 38 69.3 0 230 57 96 153 OGL54972.1 MAG: ABC transporter ATP-binding protein [Candidatus Schekmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11] diamond 174 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11
28033889 28033889 PRJNA832865_S_NODE_60965_length_318_cov_2.465306_g55879_i0 PRJNA832865 60965 318 2.465306 7.83967308 Patescibacteria group bacterium 2052139 Bacteria Bacteria 60.5 1.35e-8   NR MBP6944756.1 2052139 g55879 i0 37.5 3.35849056603774 88 49 83 2 315 52 92 173 MBP6944756.1 fasciclin domain-containing protein [Patescibacteria group bacterium] diamond 1068 60.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28822790 28822790 PRJNA832865_S_NODE_105028_length_244_cov_1.350877_g99942_i0 PRJNA832865 105028 244 1.350877 3.29613988 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 43.1 0.0083   NR MDO4684522.1 2026720 g99942 i0 39 0.725409836065574 59 32 67.6 1 73 237 42 100 MDO4684522.1 preprotein translocase subunit SecE [Candidatus Saccharibacteria bacterium] diamond 177 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29391515 29391515 PRJNA832865_S_NODE_105669_length_244_cov_0.900585_g100583_i0 PRJNA832865 105669 244 0.900585 2.1974274 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 42.4 0.0463   NR MBN1222159.1 2052149 g100583 i0 38.3 0.737704918032787 60 36 72.5 1 179 3 49 108 MBN1222159.1 ABC transporter permease subunit [Candidatus Aminicenantes bacterium] diamond 180 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30244305 30244305 PRJNA832865_S_NODE_86392_length_263_cov_1.331579_g81306_i0 PRJNA832865 86392 263 1.331579 3.50205277 Candidatus Wildermuthbacteria bacterium 2053642 Bacteria Bacteria 42.7 0.029   NR MDO8633646.1 2053642 g81306 i0 41.1 0.638783269961977 56 31 61.6 2 64 225 20 75 MDO8633646.1 dihydrofolate reductase family protein [Candidatus Wildermuthbacteria bacterium] diamond 168 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Wildermuthiibacteriota         Candidatus Wildermuthbacteria bacterium
30402557 30402557 PRJNA832865_S_NODE_100393_length_247_cov_1.155172_g95307_i0 PRJNA832865 100393 247 1.155172 2.85327484 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 43.1 0.0221   NR MBI2624657.1 2762014 g95307 i0 30 0.850202429149798 70 47 82.6 1 33 236 132 201 MBI2624657.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 210 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32046172 32046172 PRJNA832865_S_NODE_72938_length_288_cov_6.297674_g67852_i0 PRJNA832865 72938 288 6.297674 18.13730112 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 47 0.00192   NR MDD3646540.1 2044595 g67852 i0 44.4 0.5625 54 30 56.3 0 46 207 59 112 MDD3646540.1 radical SAM protein [Candidatus Altimarinota bacterium] diamond 162 47 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32584042 32584042 PRJNA832865_S_NODE_109299_length_242_cov_0.911243_g104213_i0 PRJNA832865 109299 242 0.911243 2.20520806 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 59.3 4.03e-8   NR MCA9346951.1 2026720 g104213 i0 35.7 1.67355371900826 70 45 86.8 0 3 212 38 107 MCA9346951.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 405 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;