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contig_metadata

19 rows where bioproject = "PRJNA832865" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 19 ✖

bioproject 1

  • PRJNA832865 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
823934 823934 PRJNA832865_S_NODE_91181_length_255_cov_1.692308_g86095_i0 PRJNA832865 91181 255 1.692308 4.3153854 Dictyostelium purpureum 5786 Evosea other_Eukaryota 60.2 1.38e-4   NTclustered gi|330843931|ref|XM_003293847.1| 5786 g86095 i0 97.222 0.141176470588235 36 0 14 1 142 177 1341 1375 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_158818), partial mRNA blastn 36 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
2098996 2098996 PRJNA832865_S_NODE_64102_length_309_cov_6.076271_g59016_i0 PRJNA832865 64102 309 6.076271 18.77567739 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 549 8.389999999999996e-152   NTclustered gi|365928255|gb|JN825705.1| 590481 g59016 i0 99.023 74.0744336569579 307 1 99 2 3 309 1019 715 Uncultured Amoebozoa clone Alchichica_AQ2b_5E_39 small subunit ribosomal RNA gene, partial sequence blastn 22889 549 1 Eukaryota Amoebozoa             uncultured Amoebozoa
5927095 5927095 PRJNA832865_S_NODE_95185_length_250_cov_3.118644_g90099_i0 PRJNA832865 95185 250 3.118644 7.79661 Cavenderia fasciculata 261658 Evosea other_Eukaryota 58.4 4.87e-4   NTclustered gi|470236295|ref|XM_004350051.1| 261658 g90099 i0 89.583 0.192 48 1 18 3 97 141 66 20 Cavenderia fasciculata uncharacterized protein (DFA_11158), partial mRNA blastn 48 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
7201909 7201909 PRJNA832865_S_NODE_75326_length_283_cov_2.447619_g70240_i0 PRJNA832865 75326 283 2.447619 6.92676177 root 1 Root_unresolved Root_unresolved 166 3.87e-48   NR XP_644369.1 352472 g70240 i0 84 32.469964664311 94 15 99.6 0 282 1 65 158 XP_644369.1 ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] diamond 9189 166 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
26706142 26706142 PRJNA832865_S_NODE_99381_length_248_cov_0.880000_g94295_i0 PRJNA832865 99381 248 0.88 2.1824 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 64.3 1.03e-9   NR XP_012756717.1 1410327 g94295 i0 43.1 0.870967741935484 72 40 87.1 1 247 32 4648 4718 XP_012756717.1 hypothetical protein SAMD00019534_031300 [Acytostelium subglobosum LB1] diamond 216 64.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
26833151 26833151 PRJNA832865_S_NODE_43721_length_393_cov_1.178125_g38635_i0 PRJNA832865 43721 393 1.178125 4.63003125 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.4 7.2e-16   NR XP_004340818.1 1257118 g38635 i0 46.6 1.55725190839695 103 49 75.6 3 32 328 24 124 XP_004340818.1 uncharacterized protein ACA1_040820 [Acanthamoeba castellanii str. Neff] diamond 612 82.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27465560 27465560 PRJNA832865_S_NODE_60383_length_320_cov_1.680162_g55297_i0 PRJNA832865 60383 320 1.680162 5.3765184 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.1 3.03e-13   NR XP_004338771.1 1257118 g55297 i0 41.9 0.984375 105 60 97.5 1 3 314 153 257 XP_004338771.1 CBS domain containing protein [Acanthamoeba castellanii str. Neff] diamond 315 75.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27623448 27623448 PRJNA832865_S_NODE_14664_length_1069_cov_2.189759_g10840_i0 PRJNA832865 14664 1069 2.189759 23.40852371 Entamoeba nuttalli P19 1076696 Evosea other_Eukaryota 72.4 4.03e-10   NR XP_008856919.1 1076696 g10840 i0 33.3 0.353601496725912 126 82 34.8 1 45 416 207 332 XP_008856919.1 ubiquitin carboxyl-terminal hydrolase domain containing protein [Entamoeba nuttalli P19] diamond 378 72.4 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba nuttalli
27781279 27781279 PRJNA832865_S_NODE_91224_length_255_cov_1.587912_g86138_i0 PRJNA832865 91224 255 1.587912 4.0491756 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 49.7 1.49e-4   NR XP_004339560.1 1257118 g86138 i0 34.9 0.976470588235294 83 46 96.5 2 251 6 299 374 XP_004339560.1 oxidoreductase, aldo/keto reductase superfamily protein [Acanthamoeba castellanii str. Neff] diamond 249 49.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29422755 29422755 PRJNA832865_S_NODE_52229_length_349_cov_1.115942_g47143_i0 PRJNA832865 52229 349 1.115942 3.89463758 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 138 6.98e-40   NR XP_004334523.1 1257118 g47143 i0 85.3 18.8853868194842 75 11 64.5 0 6 230 20 94 XP_004334523.1 ribosomal protein s27, putative [Acanthamoeba castellanii str. Neff] diamond 6591 138 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30528435 30528435 PRJNA832865_S_NODE_110833_length_241_cov_0.916667_g105747_i0 PRJNA832865 110833 241 0.916667 2.20916747 Dictyostelium purpureum 5786 Evosea other_Eukaryota 45.4 0.00379   NR XP_003285743.1 5786 g105747 i0 25.7 0.871369294605809 70 52 87.1 0 3 212 245 314 XP_003285743.1 uncharacterized protein DICPUDRAFT_91572 [Dictyostelium purpureum] diamond 210 45.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
31074283 31074283 PRJNA832865_S_NODE_102495_length_246_cov_0.890173_g97409_i0 PRJNA832865 102495 246 0.890173 2.18982558 Viridiplantae 33090 Evosea other_Eukaryota 70.5 3.55e-12   NR XP_004362243.1 261658 g97409 i0 54.4 3.69512195121951 57 25 69.5 1 1 171 187 242 XP_004362243.1 prolyl 4-hydroxylase [Cavenderia fasciculata] diamond 909 70.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31255250 31255250 PRJNA832865_S_NODE_76115_length_282_cov_1.210526_g71029_i0 PRJNA832865 76115 282 1.210526 3.41368332 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 62 3.18e-9   NR KYR01808.1 361077 g71029 i0 44.1 0.98936170212766 93 50 97.9 2 276 1 53 144 KYR01808.1 hypothetical protein DLAC_01821 [Tieghemostelium lacteum] diamond 279 62 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
31540094 31540094 PRJNA832865_S_NODE_63096_length_312_cov_1.882845_g58010_i0 PRJNA832865 63096 312 1.882845 5.8744764 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 117 9.47e-29   NR KAH3743477.1 1580589 g58010 i0 53.4 0.990384615384615 103 48 99 0 310 2 188 290 KAH3743477.1 glutathione-dependent formaldehyde dehydrogenase [Pelomyxa schiedti] diamond 309 117 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31571731 31571731 PRJNA832865_S_NODE_22096_length_715_cov_1.886293_g17286_i0 PRJNA832865 22096 715 1.886293 13.48699495 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 270 2.02e-83   NR PRP80412.1 1890364 g17286 i0 54.6 1.00699300699301 240 107 99.9 1 2 715 339 578 PRP80412.1 catalase [Planoprotostelium fungivorum] diamond 720 270 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31571763 31571763 PRJNA832865_S_NODE_99116_length_248_cov_0.880000_g94030_i0 PRJNA832865 99116 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 102 5.4e-23   NR XP_004367478.1 1257118 g94030 i0 76.8 1.81451612903226 69 14 81 1 243 43 152 220 XP_004367478.1 heat shock protein 90 alpha, putative [Acanthamoeba castellanii str. Neff] diamond 450 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32520972 32520972 PRJNA832865_S_NODE_54799_length_339_cov_1.131579_g49713_i0 PRJNA832865 54799 339 1.131579 3.83605281 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 154 8.45e-41   NR XP_012756853.1 1410327 g49713 i0 69.1 0.97345132743362806 110 33 97.3 1 332 3 1284 1392 XP_012756853.1 hypothetical protein SAMD00019534_032660 [Acytostelium subglobosum LB1] diamond 330 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
32686749 32686749 PRJNA832865_S_NODE_81460_length_272_cov_1.160804_g76374_i0 PRJNA832865 81460 272 1.160804 3.15738688 root 1 Root_unresolved Root_unresolved 72.4 2e-13   NR XP_003291931.1 5786 g76374 i0 51.4 2.54779411764706 72 34 78.3 1 7 219 77 148 XP_003291931.1 uncharacterized protein DICPUDRAFT_39798 [Dictyostelium purpureum] diamond 693 72.8 0.994505494505495 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32741497 32741497 PRJNA832865_S_NODE_86880_length_262_cov_1.502646_g81794_i0 PRJNA832865 86880 262 1.502646 3.93693252 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 90.1 7.23e-21   NR KAH3763125.1 1580589 g81794 i0 60.9 0.732824427480916 64 25 73.3 0 262 71 9 72 KAH3763125.1 60S acidic ribosomal protein P1 [Pelomyxa schiedti] diamond 192 90.1 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;