RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA827593" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA827593 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31445009 31445009 PRJNA827593_P_NODE_45616_length_298_cov_2.053333_g45317_i0 PRJNA827593 45616 298 2.053333 6.11893234 Adineta ricciae 249248 Rotifera other_Eukaryota 194 2.49e-61   NR CAF0917292.1 249248 g45317 i0 98 2.95973154362416 98 2 98.7 0 3 296 45 142 CAF0917292.1 unnamed protein product [Adineta ricciae] diamond 882 194 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;