RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA827593" and tax_phylum = "Kiritimatiellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA827593 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27054585 27054585 PRJNA827593_P_NODE_35902_length_341_cov_1.985075_g35603_i0 PRJNA827593 35902 341 1.985075 6.76910575 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 213 1.53e-69   NR MDE0840025.1 2212473 g35603 i0 100 0.941348973607038 107 0 94.1 0 2 322 3 109 MDE0840025.1 hypothetical protein [Kiritimatiellia bacterium] diamond 321 213 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28191327 28191327 PRJNA827593_P_NODE_54606_length_268_cov_3.230769_g54307_i0 PRJNA827593 54606 268 3.230769 8.65846092 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 56.6 5.95e-7   NR MFA7172080.1 2212473 g54307 i0 40 0.615671641791045 55 31 61.6 1 258 94 276 328 MFA7172080.1 endonuclease/exonuclease/phosphatase family protein [Kiritimatiellia bacterium] diamond 165 56.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28602114 28602114 PRJNA827593_P_NODE_54327_length_269_cov_2.147959_g54028_i0 PRJNA827593 54327 269 2.147959 5.77800971 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 57.8 2.18e-7   NR MDX9792025.1 2212473 g54028 i0 55.3 0.947955390334573 47 21 52.4 0 11 151 242 288 MDX9792025.1 DNA methyltransferase [Kiritimatiellia bacterium] diamond 255 57.8 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29012780 29012780 PRJNA827593_P_NODE_41728_length_313_cov_2.475000_g41429_i0 PRJNA827593 41728 313 2.475 7.74675 Pontiellaceae bacterium B12219 3035705 Bacteria Bacteria 91.3 7.92e-19   NR MDF7806192.1 3035705 g41429 i0 50 1.05431309904153 110 49 99.7 2 312 1 427 536 MDF7806192.1 ATP-binding protein [Pontiellaceae bacterium B12219] diamond 330 91.3 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Pontiellaceae   Pontiellaceae bacterium B12219
31634654 31634654 PRJNA827593_P_NODE_38916_length_326_cov_1.217391_g38617_i0 PRJNA827593 38916 326 1.217391 3.96869466 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 203 1.36e-61   NR MDE0838895.1 2212473 g38617 i0 99.1 0.993865030674847 108 1 99.4 0 324 1 303 410 MDE0838895.1 saccharopine dehydrogenase NADP-binding domain-containing protein [Kiritimatiellia bacterium] diamond 324 203 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;