RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA827593" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA827593 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4649604 4649604 PRJNA827593_P_NODE_3904_length_1167_cov_2.050274_g3689_i0 PRJNA827593 3904 1167 2.050274 23.92669758 Naegleria 5761 Heterolobosea other_Eukaryota 269 1.45e-76   NR XP_002672840.1 5762 g3689 i0 57.6 1.22622107969152 238 83 56.6 3 662 3 164 401 XP_002672840.1 uncharacterized protein NAEGRDRAFT_59151 [Naegleria gruberi] diamond 1431 269 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9748991 9748991 PRJNA827593_P_NODE_24508_length_424_cov_2.552707_g24209_i0 PRJNA827593 24508 424 2.552707 10.82347768 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 119 5.58e-28   NR NP_066511.1 5762 g24209 i0 44.4 1.0188679245283 144 54 99.1 2 1 420 132 253 NP_066511.1 NADH dehydrogenase subunit 5 [Naegleria gruberi] diamond 432 119 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14849096 14849096 PRJNA827593_P_NODE_31072_length_370_cov_4.895623_g30773_i0 PRJNA827593 31072 370 4.895623 18.1138051 Stachyamoeba lipophora 463046 Heterolobosea other_Eukaryota 140 8.58e-36   NR YP_009118152.1 463046 g30773 i0 55.7 0.989189189189189 122 54 98.9 0 4 369 23 144 YP_009118152.1 NADH dehydrogenase subunit 5 [Stachyamoeba lipophora] diamond 366 140 1 Eukaryota Discoba   Heterolobosea     Gruberellidae Stachyamoeba Stachyamoeba lipophora
22498358 22498358 PRJNA827593_P_NODE_61178_length_251_cov_0.865169_g60879_i0 PRJNA827593 61178 251 0.865169 2.17157419 Stachyamoeba lipophora 463046 Heterolobosea other_Eukaryota 124 1.02e-31   NR YP_009118164.1 463046 g60879 i0 66.3 1.94820717131474 83 28 99.2 0 3 251 177 259 YP_009118164.1 apocytochrome b [Stachyamoeba lipophora] diamond 489 124 1 Eukaryota Discoba   Heterolobosea     Gruberellidae Stachyamoeba Stachyamoeba lipophora
29012743 29012743 PRJNA827593_P_NODE_17568_length_512_cov_1.920273_g17270_i0 PRJNA827593 17568 512 1.920273 9.83179776 Acrasis kona 1008807 Heterolobosea other_Eukaryota 84.3 6.42e-16   NR KAL0491076.1 1008807 g17270 i0 71.4 0.287109375 49 14 28.7 0 198 52 262 310 KAL0491076.1 ubiquitin-like 1-activating enzyme E1 [Acrasis kona] diamond 147 84.3 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29264885 29264885 PRJNA827593_P_NODE_48709_length_287_cov_1.757009_g48410_i0 PRJNA827593 48709 287 1.757009 5.04261583 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 56.2 1.18e-6   NR XP_002679547.1 5762 g48410 i0 61.1 1.31707317073171 36 14 37.6 0 283 176 203 238 XP_002679547.1 uncharacterized protein NAEGRDRAFT_57455 [Naegleria gruberi] diamond 378 56.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30528421 30528421 PRJNA827593_P_NODE_66913_length_242_cov_2.047337_g66614_i0 PRJNA827593 66913 242 2.047337 4.95455554 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 76.3 5.45e-14   NR YP_007890052.1 5763 g66614 i0 57 0.979338842975207 79 33 97.9 1 3 239 336 413 YP_007890052.1 NADH dehydrogenase subunit 4 [Naegleria fowleri] diamond 237 76.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31729619 31729619 PRJNA827593_P_NODE_7637_length_808_cov_2.778231_g7364_i0 PRJNA827593 7637 808 2.778231 22.44810648 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 82.8 9.93e-14   NR CAG4708788.1 5763 g7364 i0 23.8 0.998762376237624 269 187 98.8 5 3 800 1097 1350 CAG4708788.1 unnamed protein product [Naegleria fowleri] diamond 807 82.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31824361 31824361 PRJNA827593_P_NODE_3937_length_1160_cov_2.683533_g3722_i0 PRJNA827593 3937 1160 2.683533 31.1289828 Acrasis kona 1008807 Heterolobosea other_Eukaryota 207 5.0299999999999993e-57   NR KAL0491389.1 1008807 g3722 i0 39.9 1.60086206896552 308 173 78.1 5 12 917 28 329 KAL0491389.1 NHL repeat-containing protein, partial [Acrasis kona] diamond 1857 207 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;