contig_metadata
2 rows where bioproject = "PRJNA827593" and tax_phylum = "Candidatus Giovannoniibacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28642341 | 28642341 | PRJNA827593_P_NODE_54607_length_268_cov_3.205128_g54308_i0 | PRJNA827593 | 54607 | 268 | 3.205128 | 8.58974304 | Bacteria | 2 | Bacteria | Bacteria | 136 | 3.52e-36 | NR | OGF64492.1 | 1798326 | g54308 | i0 | 81.1 | 3.3134328358209 | 74 | 14 | 82.8 | 0 | 8 | 229 | 3 | 76 | OGF64492.1 MAG: hypothetical protein A2661_03045 [Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_45_24] | diamond | 888 | 136 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Giovannoniibacteriota | Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_45_24 | ||||||
| 32835601 | 32835601 | PRJNA827593_P_NODE_41260_length_315_cov_2.479339_g40961_i0 | PRJNA827593 | 41260 | 315 | 2.479339 | 7.80991785 | Candidatus Giovannonibacteria bacterium | 2053557 | Bacteria | Bacteria | 43.9 | 0.0361 | NR | MBI2024263.1 | 2053557 | g40961 | i0 | 36.1 | 0.580952380952381 | 61 | 39 | 58.1 | 0 | 195 | 13 | 779 | 839 | MBI2024263.1 hypothetical protein [Candidatus Giovannonibacteria bacterium] | diamond | 183 | 43.9 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Giovannoniibacteriota | Candidatus Giovannonibacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;