RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA827593", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA827593 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2097302 2097302 PRJNA827593_P_NODE_8922_length_744_cov_4.263785_g8636_i0 PRJNA827593 8922 744 4.263785 31.7225604 Chemarfal virus 260 3063286 Viruses Viruses 582 2.1399999999999998e-161   NTclustered gi|2626079958|gb|OR270550.1| 3063286 g8636 i0 94.906 3.09408602150538 373 18 50 1 359 730 1431 1059 MAG: Chemarfal virus 260 isolate ML188 genomic sequence blastn 2302 582 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 260
5924136 5924136 PRJNA827593_P_NODE_2305_length_1553_cov_2.058108_g2126_i0 PRJNA827593 2305 1553 2.058108 31.96241724 Totivirus sp. 2776824 Viruses Viruses 549 4.639999999999999e-151   NTclustered gi|1918615619|gb|MT949668.1| 2776824 g2126 i0 79.841 0.48551191242756 754 150 48 2 182 934 753 1 Totivirus sp. isolate sequence_10295 genomic sequence blastn 754 549 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus sp.
30528356 30528356 PRJNA827593_P_NODE_18493_length_498_cov_1.268235_g18195_i0 PRJNA827593 18493 498 1.268235 6.3158103 Totiviridae sp. 1955172 Viruses Viruses 109 2.37e-24   NR WAK77569.1 1955172 g18195 i0 44.4 0.704819277108434 117 65 70.5 0 496 146 577 693 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 351 109 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;