RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA827593", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA827593 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27244155 27244155 PRJNA827593_P_NODE_35903_length_341_cov_1.958955_g35604_i0 PRJNA827593 35903 341 1.958955 6.68003655 Thermoplasmata archaeon 1906666 Archaea Archaea 95.1 2e-20   NR MEM0353959.1 1906666 g35604 i0 42.9 1.82111436950147 98 56 86.2 0 8 301 126 223 MEM0353959.1 TIGR03118 family protein [Thermoplasmata archaeon] diamond 621 95.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30086043 30086043 PRJNA827593_P_NODE_54552_length_269_cov_1.178571_g54253_i0 PRJNA827593 54552 269 1.178571 3.17035599 Thermoplasmata archaeon 1906666 Archaea Archaea 86.7 1.86e-17   NR MEM0354068.1 1906666 g54253 i0 50.5 1.01486988847584 91 38 99.3 3 2 268 165 250 MEM0354068.1 hypothetical protein [Thermoplasmata archaeon] diamond 273 86.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;