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contig_metadata

24 rows where bioproject = "PRJNA827593" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA827593 · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2096501 2096501 PRJNA827593_P_NODE_25422_length_416_cov_1.244898_g25123_i0 PRJNA827593 25422 416 1.244898 5.17877568 root 1 Root_unresolved Root_unresolved 192 9.59e-54   NR WP_324474872.1 45200 g25123 i0 65.2 12.9447115384615 138 47 99.5 1 3 416 558 694 WP_324474872.1 type I restriction endonuclease subunit R [Methanospirillum sp.] diamond 5385 192 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum sp.
8474047 8474047 PRJNA827593_P_NODE_36987_length_335_cov_3.675573_g36688_i0 PRJNA827593 36987 335 3.675573 12.31316955 Methanosarcina acetivorans 2214 Archaea Archaea 52.8 0.032   NTclustered gi|19918815|gb|AE010299.1| 188937 g36688 i0 100 0.0835820895522388 28 0 8 0 230 257 2077152 2077179 Methanosarcina acetivorans str. C2A, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina acetivorans
12300181 12300181 PRJNA827593_P_NODE_24950_length_420_cov_1.902017_g24651_i0 PRJNA827593 24950 420 1.902017 7.9884714 Natrarchaeobaculum aegyptiacum 745377 Archaea Archaea 56.5 0.003   NTclustered gi|1196598842|gb|CP019893.1| 745377 g24651 i0 100 0.0714285714285714 30 0 7 0 44 73 2973647 2973618 Natrarchaeobaculum aegyptiacum strain JW/NM-HA 15 chromosome, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrarchaeobaculum Natrarchaeobaculum aegyptiacum
17399242 17399242 PRJNA827593_P_NODE_22634_length_444_cov_1.207547_g22335_i0 PRJNA827593 22634 444 1.207547 5.36150868 Thermococcus sp. GR5 1638255 Archaea Archaea 176 4.9999999999999996e-54   NR WP_167731702.1 1638255 g22335 i0 97.8 0.608108108108108 90 2 60.8 0 174 443 1 90 WP_167731702.1 ABC transporter ATP-binding protein, partial [Thermococcus sp. GR5] diamond 270 176 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. GR5
25047873 25047873 PRJNA827593_P_NODE_58460_length_258_cov_1.659459_g58161_i0 PRJNA827593 58460 258 1.659459 4.28140422 Haloferax mediterranei 2252 Archaea Archaea 52.8 0.023   NTclustered gi|640913992|gb|CP001868.2| 523841 g58161 i0 100 0.325581395348837 28 0 11 0 18 45 2426173 2426146 Haloferax mediterranei ATCC 33500, complete genome blastn 84 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax mediterranei
26619931 26619931 PRJNA827593_P_NODE_17401_length_514_cov_3.716553_g17103_i0 PRJNA827593 17401 514 3.716553 19.10308242 root 1 Root_unresolved Root_unresolved 108 5.2699999999999994e-24   NR MDD4580503.1 90426 g17103 i0 54.2 1.86186770428016 107 48 61.9 1 414 97 1 107 MDD4580503.1 glycosyltransferase [Methanothrix sp.] diamond 957 108 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
26737497 26737497 PRJNA827593_P_NODE_10301_length_688_cov_2.422764_g10011_i0 PRJNA827593 10301 688 2.422764 16.66861632 Thermococcus sp. M36 1638261 Archaea Archaea 259 1.95e-85   NR WP_167895510.1 1638261 g10011 i0 100 0.571220930232558 131 0 57.1 0 259 651 1 131 WP_167895510.1 hypothetical protein [Thermococcus sp. M36] diamond 393 259 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. M36
27031431 27031431 PRJNA827593_P_NODE_19842_length_478_cov_1.661728_g19544_i0 PRJNA827593 19842 478 1.661728 7.94305984 root 1 Root_unresolved Root_unresolved 221 1.85e-70   NR WP_167895507.1 1638261 g19544 i0 100 1.30543933054393 104 0 65.3 0 312 1 1 104 WP_167895507.1 hypothetical protein, partial [Thermococcus sp. M36] diamond 624 221 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. M36
27086192 27086192 PRJNA827593_P_NODE_21242_length_460_cov_1.297158_g20944_i0 PRJNA827593 21242 460 1.297158 5.9669268 Methanobacteriota archaeon 2026739 Archaea Archaea 67.8 7.33e-10   NR RYE99733.1 2026739 g20944 i0 48.8 0.521739130434783 80 40 52.2 1 250 11 7 85 RYE99733.1 MAG: hypothetical protein EOO41_00630, partial [Methanobacteriota archaeon] diamond 240 67.8 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27244155 27244155 PRJNA827593_P_NODE_35903_length_341_cov_1.958955_g35604_i0 PRJNA827593 35903 341 1.958955 6.68003655 Thermoplasmata archaeon 1906666 Archaea Archaea 95.1 2e-20   NR MEM0353959.1 1906666 g35604 i0 42.9 1.82111436950147 98 56 86.2 0 8 301 126 223 MEM0353959.1 TIGR03118 family protein [Thermoplasmata archaeon] diamond 621 95.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27497004 27497004 PRJNA827593_P_NODE_52583_length_274_cov_2.452736_g52284_i0 PRJNA827593 52583 274 2.452736 6.72049664 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 77 1.52e-15   NR MCZ7382623.1 2032688 g52284 i0 46.3 1.65328467153285 80 42 87.6 1 16 255 3 81 MCZ7382623.1 50S ribosomal protein L11 [Candidatus Methanoperedens sp.] diamond 453 77 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
27528412 27528412 PRJNA827593_P_NODE_34403_length_350_cov_1.108303_g34104_i0 PRJNA827593 34403 350 1.108303 3.8790605 Archaeoglobaceae archaeon 2511821 Archaea Archaea 132 5.979999999999999e-34   NR MEM1672925.1 2511821 g34104 i0 58.6 0.951428571428571 111 46 95.1 0 16 348 225 335 MEM1672925.1 replicative DNA helicase [Archaeoglobaceae archaeon] diamond 333 132 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
28349372 28349372 PRJNA827593_P_NODE_42386_length_311_cov_1.294118_g42087_i0 PRJNA827593 42386 311 1.294118 4.02470698 Methanosarcinales archaeon 2250255 Archaea Archaea 99 4.76e-22   NR RYE85335.1 2250255 g42087 i0 56 0.877813504823151 91 33 87.8 1 23 295 73 156 RYE85335.1 MAG: hypothetical protein EOO65_00610 [Methanosarcinales archaeon] diamond 273 99 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28539035 28539035 PRJNA827593_P_NODE_2687_length_1432_cov_4.470935_g2494_i0 PRJNA827593 2687 1432 4.470935 64.0237892 Thermococcus sp. M36 1638261 Archaea Archaea 222 1.1999999999999998e-67   NR WP_206203666.1 1638261 g2494 i0 100 0.224162011173184 107 0 22.4 0 357 37 1 107 WP_206203666.1 hypothetical protein, partial [Thermococcus sp. M36] diamond 321 222 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. M36
28602074 28602074 PRJNA827593_P_NODE_3027_length_1345_cov_2.540881_g2823_i0 PRJNA827593 3027 1345 2.540881 34.17484945 Theionarchaea archaeon 2747605 Archaea Archaea 459 3.7199999999999986e-148   NR MBU7018736.1 2747605 g2823 i0 53 3.9724907063197 445 208 99.3 1 7 1341 347 790 MBU7018736.1 DEAD/DEAH box helicase [Theionarchaea archaeon] diamond 5343 459 1 Archaea   Methanobacteriati Methanobacteriota Theionarchaea       Theionarchaea archaeon
28665260 28665260 PRJNA827593_P_NODE_46667_length_294_cov_2.565611_g46368_i0 PRJNA827593 46667 294 2.565611 7.54289634 Candidatus Argoarchaeum ethanivorans 2608793 Archaea Archaea 86.7 2.14e-17   NR RZB31008.1 2608793 g46368 i0 45.2 1.71428571428571 84 45 85.7 1 292 41 296 378 RZB31008.1 MAG: hypothetical protein AEth_00962 [Candidatus Argoarchaeum ethanivorans] diamond 504 86.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales   Candidatus Argoarchaeum Candidatus Argoarchaeum ethanivorans
29746986 29746986 PRJNA827593_P_NODE_21750_length_454_cov_1.551181_g21452_i0 PRJNA827593 21750 454 1.551181 7.04236174 root 1 Root_unresolved Root_unresolved 244 3.07e-80   NR WP_167895525.1 1638261 g21452 i0 98.5 1.71806167400881 130 2 85.9 0 452 63 53 182 WP_167895525.1 FadR/GntR family transcriptional regulator, partial [Thermococcus sp. M36] diamond 780 244 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. M36
30086043 30086043 PRJNA827593_P_NODE_54552_length_269_cov_1.178571_g54253_i0 PRJNA827593 54552 269 1.178571 3.17035599 Thermoplasmata archaeon 1906666 Archaea Archaea 86.7 1.86e-17   NR MEM0354068.1 1906666 g54253 i0 50.5 1.01486988847584 91 38 99.3 3 2 268 165 250 MEM0354068.1 hypothetical protein [Thermoplasmata archaeon] diamond 273 86.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30947998 30947998 PRJNA827593_P_NODE_32434_length_361_cov_3.236111_g32135_i0 PRJNA827593 32434 361 3.236111 11.68236071 root 1 Root_unresolved Root_unresolved 217 2.19e-70   NR WP_167895504.1 1638261 g32135 i0 100 1.77839335180055 107 0 88.9 0 20 340 1 107 WP_167895504.1 TraB/GumN family protein, partial [Thermococcus sp. M36] diamond 642 217 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. M36
31327007 31327007 PRJNA827593_P_NODE_26555_length_405_cov_2.331325_g26256_i0 PRJNA827593 26555 405 2.331325 9.44186625 root 1 Root_unresolved Root_unresolved 198 8.69e-63   NR WP_167893422.1 1638263 g26256 i0 99.1 1.58518518518519 107 1 79.3 0 85 405 18 124 WP_167893422.1 hypothetical protein, partial [Thermococcus sp. MAR1] diamond 642 198 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. MAR1
31327015 31327015 PRJNA827593_P_NODE_49355_length_285_cov_1.452830_g49056_i0 PRJNA827593 49355 285 1.45283 4.1405655 root 1 Root_unresolved Root_unresolved 182 1.3599999999999996e-55   NR WP_167895489.1 1638261 g49056 i0 98.9 1.97894736842105 94 1 98.9 0 283 2 99 192 WP_167895489.1 outer membrane beta-barrel protein, partial [Thermococcus sp. M36] diamond 564 182 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. M36
31928037 31928037 PRJNA827593_P_NODE_6677_length_870_cov_2.613551_g6411_i0 PRJNA827593 6677 870 2.613551 22.7378937 root 1 Root_unresolved Root_unresolved 332 1.8099999999999994e-112   NR WP_167895500.1 1638261 g6411 i0 99.4 1.17931034482759 171 1 59 0 79 591 10 180 WP_167895500.1 DUF4954 family protein, partial [Thermococcus sp. M36] diamond 1026 332 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. M36
32466160 32466160 PRJNA827593_P_NODE_2139_length_1612_cov_9.321637_g1962_i0 PRJNA827593 2139 1612 9.321637 150.26478844 root 1 Root_unresolved Root_unresolved 289 1.73e-92   NR WP_167895546.1 1638261 g1962 i0 100 0.53970223325062 145 0 27 0 1177 1611 1 145 WP_167895546.1 pyridoxamine 5'-phosphate oxidase, partial [Thermococcus sp. M36] diamond 870 289 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. M36
32781150 32781150 PRJNA827593_P_NODE_31140_length_370_cov_1.814815_g30841_i0 PRJNA827593 31140 370 1.814815 6.7148155 Halococcus 2249 Archaea Archaea 54.7 9.61e-6   NR RBI58627.1 29295 g30841 i0 41.8 1.36216216216216 79 42 60.8 2 225 1 175 253 RBI58627.1 hypothetical protein DMJ13_26235 [halophilic archaeon] diamond 504 55.1 0.992740471869329 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     halophilic archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;