RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA827593", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA827593 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13574647 13574647 PRJNA827593_P_NODE_33211_length_357_cov_1.355634_g32912_i0 PRJNA827593 33211 357 1.355634 4.83961338 Hirudo verbana 311461 Annelida Annelida 62.1 5.62e-5   NTclustered gi|2918369616|emb|OZ237781.1| 311461 g32912 i0 97.222 5.36134453781513 36 1 10 0 246 281 1056411 1056376 Hirudo verbana genome assembly, chromosome: 3 blastn 1914 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
18673093 18673093 PRJNA827593_P_NODE_69335_length_231_cov_2.006329_g69036_i0 PRJNA827593 69335 231 2.006329 4.63461999 Stylaria sp. THS-2006 397589 Annelida Annelida 357 3.91e-94   NTclustered gi|111559330|gb|DQ790065.1| 397589 g69036 i0 97.17 90.2987012987013 212 4 91 1 1 210 2010 1799 Stylaria sp. THS-2006 28S large subunit ribosomal RNA gene, partial sequence blastn 20859 357 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Stylaria Stylaria sp. THS-2006

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;