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contig_metadata

29 rows where bioproject = "PRJNA827593" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 29 ✖

bioproject 1

  • PRJNA827593 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5923934 5923934 PRJNA827593_P_NODE_11805_length_638_cov_2.079646_g11513_i0 PRJNA827593 11805 638 2.079646 13.26814148 Coccomyxa subellipsoidea 248742 Plants Plants 79.7 2.79e-13   NR KAK9909002.1 248742 g11513 i0 64.1 0.300940438871473 64 20 30.1 1 429 238 28 88 KAK9909002.1 hypothetical protein WJX75_005921 [Coccomyxa subellipsoidea] diamond 192 79.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
9749131 9749131 PRJNA827593_P_NODE_32688_length_360_cov_1.418118_g32389_i0 PRJNA827593 32688 360 1.418118 5.1052248 Coccomyxa elongata 1965095 Plants Plants 92 8.07e-19   NR CAL8471131.1 1965095 g32389 i0 95.5 0.366666666666667 44 2 36.7 0 61 192 1088 1131 CAL8471131.1 g10673 [Coccomyxa elongata] diamond 132 92 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
14848771 14848771 PRJNA827593_P_NODE_11072_length_662_cov_2.850594_g10781_i0 PRJNA827593 11072 662 2.850594 18.87093228 Coccomyxa subellipsoidea 248742 Plants Plants 134 2.29e-26   NTclustered gi|545360285|ref|XM_005645473.1| 574566 g10781 i0 89.524 0.158610271903323 105 11 16 0 89 193 464 568 Coccomyxa subellipsoidea C-169 acyl-CoA dehydrogenase NM domain-like protein partial mRNA blastn 105 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
17399389 17399389 PRJNA827593_P_NODE_30934_length_371_cov_3.308725_g30635_i0 PRJNA827593 30934 371 3.308725 12.27536975 Coccomyxa subellipsoidea 248742 Plants Plants 117 1.2300000000000002e-21   NTclustered gi|545374769|ref|XM_005651574.1| 574566 g30635 i0 89.247 0.250673854447439 93 10 25 0 14 106 579 487 Coccomyxa subellipsoidea C-169 ABC1-domain-containing protein partial mRNA blastn 93 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
21222884 21222884 PRJNA827593_P_NODE_17937_length_506_cov_1.942263_g17639_i0 PRJNA827593 17937 506 1.942263 9.82785078 Coccomyxa subellipsoidea 248742 Plants Plants 174 1.0099999999999999e-38   NTclustered gi|545362574|ref|XM_005646448.1| 574566 g17639 i0 93.22 0.233201581027668 118 8 23 0 389 506 3944 4061 Coccomyxa subellipsoidea C-169 P-loop containing nucleoside triphosphate hydrolase protein partial mRNA blastn 118 174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
26905031 26905031 PRJNA827593_P_NODE_66601_length_243_cov_0.905882_g66302_i0 PRJNA827593 66601 243 0.905882 2.20129326 Chlorophyta 3041 Plants Plants 43.9 0.00158   NR GFH27157.1 44745 g66302 i0 54.3 4.45679012345679 35 16 43.2 0 6 110 22 56 GFH27157.1 histone methyltransferase, partial [Haematococcus lacustris] diamond 1083 43.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
26990971 26990971 PRJNA827593_P_NODE_28022_length_393_cov_1.546875_g27723_i0 PRJNA827593 28022 393 1.546875 6.07921875 Coccomyxa sp. Obi 2315456 Plants Plants 178 1.28e-49   NR BDA49665.1 2315456 g27723 i0 93.7 0.725190839694656 95 6 72.5 0 106 390 459 553 BDA49665.1 G-protein coupled receptor-associated protein LMBRD2 [Coccomyxa sp. Obi] diamond 285 178 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
27022909 27022909 PRJNA827593_P_NODE_6802_length_863_cov_1.224051_g6535_i0 PRJNA827593 6802 863 1.224051 10.56356013 Coccomyxa subellipsoidea C-169 574566 Plants Plants 107 1.05e-22   NR XP_005650177.1 574566 g6535 i0 70.9 0.274623406720742 79 23 27.5 0 501 265 187 265 XP_005650177.1 hypothetical protein COCSUDRAFT_83640 [Coccomyxa subellipsoidea C-169] diamond 237 107 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27086208 27086208 PRJNA827593_P_NODE_38722_length_327_cov_1.169291_g38423_i0 PRJNA827593 38722 327 1.169291 3.82358157 Coccomyxa subellipsoidea C-169 574566 Plants Plants 62 1.67e-8   NR XP_005650617.1 574566 g38423 i0 87.9 0.302752293577982 33 4 30.3 0 216 314 173 205 XP_005650617.1 phenylalanyl-tRNA synthetase [Coccomyxa subellipsoidea C-169] diamond 99 62 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27402251 27402251 PRJNA827593_P_NODE_26703_length_404_cov_1.731118_g26404_i0 PRJNA827593 26703 404 1.731118 6.99371672 Coccomyxa sp. Obi 2315456 Plants Plants 97.8 1.24e-20   NR BDA41625.1 2315456 g26404 i0 45.5 2.46534653465347 112 51 78 3 317 3 533 641 BDA41625.1 NF-X1-type zinc finger protein NFXL1 [Coccomyxa sp. Obi] diamond 996 97.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
27465463 27465463 PRJNA827593_P_NODE_24703_length_422_cov_2.687679_g24404_i0 PRJNA827593 24703 422 2.687679 11.34200538 Tetradesmus obliquus 3088 Plants Plants 55.8 7.02e-6   NR WIA12147.1 3088 g24404 i0 30.1 1.60663507109005 113 74 77.5 2 4 330 342 453 WIA12147.1 hypothetical protein OEZ85_012220 [Tetradesmus obliquus] diamond 678 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
27537127 27537127 PRJNA827593_P_NODE_40083_length_320_cov_3.109312_g39784_i0 PRJNA827593 40083 320 3.109312 9.9497984 Coccomyxa 41891 Plants Plants 76.6 1.13e-13   NR KAK9904857.1 248742 g39784 i0 42.5 2.98125 106 6 99.4 1 319 2 164 214 KAK9904857.1 hypothetical protein WJX75_003941 [Coccomyxa subellipsoidea] diamond 954 77 0.994805194805195 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27970423 27970423 PRJNA827593_P_NODE_18705_length_494_cov_3.539192_g18407_i0 PRJNA827593 18705 494 3.539192 17.48360848 Symbiochloris irregularis 706552 Plants Plants 60.1 1.99e-7   NR KAK9789564.1 706552 g18407 i0 38 0.65587044534413 108 58 63.8 4 179 493 1 102 KAK9789564.1 hypothetical protein WJX73_008546 [Symbiochloris irregularis] diamond 324 60.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
28831517 28831517 PRJNA827593_P_NODE_13368_length_595_cov_3.584291_g13074_i0 PRJNA827593 13368 595 3.584291 21.32653145 Coccomyxa 41891 Plants Plants 145 1.64e-36   NR CAL8463740.1 1965095 g13074 i0 53.6 2.31428571428571 153 3 77.1 1 530 72 36 120 CAL8463740.1 g3274 [Coccomyxa elongata] diamond 1377 145 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
29517556 29517556 PRJNA827593_P_NODE_61230_length_251_cov_0.865169_g60931_i0 PRJNA827593 61230 251 0.865169 2.17157419 Tupiella akineta 160070 Plants Plants 47 0.00132   NR YP_025817.1 160070 g60931 i0 54.3 1.0996015936255 46 17 51.4 2 94 222 503 547 YP_025817.1 NADH dehydrogenase subunit 5 [Tupiella akineta] diamond 276 47 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Tupiellaceae Tupiella Tupiella akineta
29738366 29738366 PRJNA827593_P_NODE_24110_length_428_cov_1.957746_g23811_i0 PRJNA827593 24110 428 1.957746 8.37915288 Coccomyxa sp. Obi 2315456 Plants Plants 118 2.69e-28   NR BDA49706.1 2315456 g23811 i0 70.2 1.31775700934579 94 19 65.9 1 96 377 86 170 BDA49706.1 Endoglucanase F [Coccomyxa sp. Obi] diamond 564 118 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
30876007 30876007 PRJNA827593_P_NODE_49114_length_286_cov_1.215962_g48815_i0 PRJNA827593 49114 286 1.215962 3.47765132 Prototheca wickerhamii 3111 Plants Plants 45.8 0.00538   NR KAK2076336.1 3111 g48815 i0 43.9 0.597902097902098 57 27 54.5 1 110 265 331 387 KAK2076336.1 hypothetical protein QBZ16_000861 [Prototheca wickerhamii] diamond 171 45.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
31002447 31002447 PRJNA827593_P_NODE_25874_length_411_cov_3.008876_g25575_i0 PRJNA827593 25874 411 3.008876 12.36648036 Coccomyxa subellipsoidea C-169 574566 Plants Plants 85.9 1.56e-16   NR XP_005649356.1 574566 g25575 i0 80 0.656934306569343 45 9 32.8 0 136 2 156 200 XP_005649356.1 radical SAM enzyme [Coccomyxa subellipsoidea C-169] diamond 270 85.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
31002505 31002505 PRJNA827593_P_NODE_9714_length_711_cov_1.783699_g9425_i0 PRJNA827593 9714 711 1.783699 12.68209989 Coccomyxa sp. Obi 2315456 Plants Plants 241 5.05e-76   NR BDA42616.1 2315456 g9425 i0 72.9 0.763713080168776 181 4 76.4 1 130 672 145 280 BDA42616.1 Ycf3-interacting protein 1, chloroplastic [Coccomyxa sp. Obi] diamond 543 241 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
31065783 31065783 PRJNA827593_P_NODE_30495_length_374_cov_4.172757_g30196_i0 PRJNA827593 30495 374 4.172757 15.60611118 Coccomyxa elongata 1965095 Plants Plants 48.5 0.00145   NR CAL8466001.1 1965095 g30196 i0 50.9 0.425133689839572 53 25 42.5 1 354 196 350 401 CAL8466001.1 g5537 [Coccomyxa elongata] diamond 159 48.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
31105627 31105627 PRJNA827593_P_NODE_28115_length_392_cov_1.931034_g27816_i0 PRJNA827593 28115 392 1.931034 7.56965328 Coccomyxa 41891 Plants Plants 91.3 2.04e-18   NR CAL8462913.1 1965095 g27816 i0 46.9 1.98979591836735 130 59 99.5 3 3 392 518 637 CAL8462913.1 g2447 [Coccomyxa elongata] diamond 780 91.7 0.995637949836423 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
31159953 31159953 PRJNA827593_P_NODE_31155_length_370_cov_1.643098_g30856_i0 PRJNA827593 31155 370 1.643098 6.0794626 [Myrmecia] bisecta 41462 Plants Plants 47 7.27e-4   NR KAK9807850.1 41462 g30856 i0 36 0.608108108108108 75 47 60.8 1 59 283 18 91 KAK9807850.1 hypothetical protein WJX72_011274 [[Myrmecia] bisecta] diamond 225 47 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
31508368 31508368 PRJNA827593_P_NODE_25316_length_417_cov_1.241279_g25017_i0 PRJNA827593 25316 417 1.241279 5.17613343 Micractinium conductrix 554055 Plants Plants 127 5.119999999999999e-31   NR PSC76943.1 554055 g25017 i0 50 1.00719424460432 140 59 99.3 4 3 416 457 587 PSC76943.1 gluconolactonase isoform B [Micractinium conductrix] diamond 420 127 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
31706637 31706637 PRJNA827593_P_NODE_32237_length_363_cov_1.327586_g31938_i0 PRJNA827593 32237 363 1.327586 4.81913718 Coccomyxa 41891 Plants Plants 51.6 8.13e-5   NR XP_005652372.1 574566 g31938 i0 71.4 0.578512396694215 35 7 26.4 1 301 206 103 137 XP_005652372.1 hypothetical protein COCSUDRAFT_83448 [Coccomyxa subellipsoidea C-169] diamond 210 52 0.992307692307692 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32046129 32046129 PRJNA827593_P_NODE_65538_length_244_cov_1.801170_g65239_i0 PRJNA827593 65538 244 1.80117 4.3948548 Edaphochlamys debaryana 47281 Plants Plants 67 1.08e-10   NR KAG2488077.1 47281 g65239 i0 52.7 0.676229508196721 55 26 67.6 0 4 168 417 471 KAG2488077.1 hypothetical protein HYH03_013380 [Edaphochlamys debaryana] diamond 165 67 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
32077656 32077656 PRJNA827593_P_NODE_47538_length_291_cov_1.940367_g47239_i0 PRJNA827593 47538 291 1.940367 5.64646797 Coccomyxa subellipsoidea 248742 Plants Plants 70.1 1.59e-11   NR KAK9905476.1 248742 g47239 i0 66.7 0.463917525773196 45 15 46.4 0 180 46 462 506 KAK9905476.1 hypothetical protein WJX75_000563 [Coccomyxa subellipsoidea] diamond 135 70.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32118017 32118017 PRJNA827593_P_NODE_6918_length_855_cov_1.686701_g6651_i0 PRJNA827593 6918 855 1.686701 14.42129355 Coccomyxa 41891 Plants Plants 73.6 1.97e-11   NR KAK9916060.1 248742 g6651 i0 74.4 0.435087719298246 43 11 15.1 0 2 130 158 200 KAK9916060.1 hypothetical protein WJX75_007987 [Coccomyxa subellipsoidea] diamond 372 73.9 0.995940460081191 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32466170 32466170 PRJNA827593_P_NODE_66999_length_242_cov_1.763314_g66700_i0 PRJNA827593 66999 242 1.763314 4.26721988 Coccomyxa 41891 Plants Plants 45.8 0.00282   NR KAK9902049.1 248742 g66700 i0 62.5 0.793388429752066 32 11 38.4 1 240 148 33 64 KAK9902049.1 hypothetical protein WJX75_002629 [Coccomyxa subellipsoidea] diamond 192 46.2 0.991341991341991 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32812716 32812716 PRJNA827593_P_NODE_33120_length_357_cov_2.260563_g32821_i0 PRJNA827593 33120 357 2.260563 8.07020991 Coccomyxa 41891 Plants Plants 201 2.3600000000000007e-59   NR YP_004339029.1 574566 g32821 i0 88.1 2.97478991596639 118 14 99.2 0 2 355 444 561 YP_004339029.1 NADH dehydrogenase subunit 2 [Coccomyxa subellipsoidea C-169] diamond 1062 202 0.995049504950495 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;