contig_metadata
1 row where bioproject = "PRJNA827593" and tax_clade = "SAR92 clade"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21223770 | 21223770 | PRJNA827593_P_NODE_66537_length_243_cov_0.905882_g66238_i0 | PRJNA827593 | 66537 | 243 | 0.905882 | 2.20129326 | Gammaproteobacteria bacterium LSUCC | 1913989 | Bacteria | Bacteria | 110 | 3.5e-26 | NR | TFH67381.1 | 2559237 | g66238 | i0 | 71.3 | 1.93827160493827 | 80 | 23 | 98.8 | 0 | 242 | 3 | 385 | 464 | TFH67381.1 carbohydrate kinase [Gammaproteobacteria bacterium LSUCC0057] | diamond | 471 | 110 | 1 | Bacteria | SAR92 clade | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Cellvibrionales | Porticoccaceae | Gammaproteobacteria bacterium LSUCC0057 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;