RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA827593", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA827593 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27781192 27781192 PRJNA827593_P_NODE_48624_length_287_cov_2.345794_g48325_i0 PRJNA827593 48624 287 2.345794 6.73242878 Nitrospinales bacterium 2833568 Bacteria Bacteria 112 1.28e-26   NR MFQ5716830.1 2833568 g48325 i0 53.7 0.993031358885017 95 44 99.3 0 3 287 499 593 MFQ5716830.1 S8 family peptidase [Nitrospinales bacterium] diamond 285 112 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales     Nitrospinales bacterium
32457540 32457540 PRJNA827593_P_NODE_62579_length_249_cov_0.875000_g62280_i0 PRJNA827593 62579 249 0.875 2.17875 Nitrospinota bacterium 2026769 Bacteria Bacteria 42.7 0.022   NR MDH5762831.1 2026769 g62280 i0 45.1 0.614457831325301 51 28 61.4 0 39 191 10 60 MDH5762831.1 DUF1566 domain-containing protein [Nitrospinota bacterium] diamond 153 42.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;