RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA827593", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA827593 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
821781 821781 PRJNA827593_P_NODE_68101_length_241_cov_0.916667_g67802_i0 PRJNA827593 68101 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 139 1.4399999999999998e-37   NR HVX90252.1 2053589 g67802 i0 81.9 2.06639004149378 83 11 98.3 1 238 2 243 325 HVX90252.1 IS256 family transposase [Candidatus Paceibacterota bacterium] diamond 498 139 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28380962 28380962 PRJNA827593_P_NODE_49186_length_285_cov_3.188679_g48887_i0 PRJNA827593 49186 285 3.188679 9.08773515 Minisyncoccota bacterium 2053589 Bacteria Bacteria 125 2.49e-34   NR MBI5151336.1 2053589 g48887 i0 69.4 0.894736842105263 85 26 89.5 0 263 9 75 159 MBI5151336.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 255 125 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31476749 31476749 PRJNA827593_P_NODE_34996_length_346_cov_2.098901_g34697_i0 PRJNA827593 34996 346 2.098901 7.26219746 Minisyncoccota bacterium 2053589 Bacteria Bacteria 47.4 0.00295   NR MDR3519291.1 2053589 g34697 i0 54.5 0.38150289017341 44 20 38.2 0 142 11 275 318 MDR3519291.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Paceibacterota bacterium] diamond 132 47.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32077623 32077623 PRJNA827593_P_NODE_22118_length_449_cov_2.859043_g21819_i0 PRJNA827593 22118 449 2.859043 12.83710307 Minisyncoccota bacterium 2053589 Bacteria Bacteria 292 2.9299999999999993e-95   NR MDR3557945.1 2053589 g21819 i0 95.2 0.975501113585746 146 7 97.6 0 443 6 127 272 MDR3557945.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 438 292 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32331178 32331178 PRJNA827593_P_NODE_8139_length_782_cov_2.754584_g7858_i0 PRJNA827593 8139 782 2.754584 21.54084688 Minisyncoccota bacterium 2053589 Bacteria Bacteria 136 2.3899999999999995e-32   NR MFA6271082.1 2053589 g7858 i0 67.3 1.16240409207161 101 31 38.7 1 777 475 1146 1244 MFA6271082.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 909 136 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;