RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA827593", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA827593 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17399217 17399217 PRJNA827593_P_NODE_21194_length_460_cov_2.224806_g20896_i0 PRJNA827593 21194 460 2.224806 10.2341076 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 56.5 0.003   NTclustered gi|1876390488|gb|CP058602.1| 2026804 g20896 i0 97.059 0.0739130434782609 34 0 7 1 93 125 107614 107647 MAG: Candidatus Woesebacteria bacterium isolate Ch104c chromosome, complete genome blastn 34 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
27125928 27125928 PRJNA827593_P_NODE_49482_length_285_cov_0.957547_g49183_i0 PRJNA827593 49482 285 0.957547 2.72900895 Bacteria 2 Bacteria Bacteria 42.4 0.0432   NR OGM23015.1 1802495 g49183 i0 33.7 1.52631578947368 83 48 87.4 2 260 12 79 154 OGM23015.1 MAG: hypothetical protein A2691_03720 [Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_23] diamond 435 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_23
28380903 28380903 PRJNA827593_P_NODE_11566_length_646_cov_1.612565_g11274_i0 PRJNA827593 11566 646 1.612565 10.4171699 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 311 7.64e-98   NR MBP7700552.1 2026804 g11274 i0 72.4 1.0077399380805 217 56 99.8 2 1 645 7 221 MBP7700552.1 cadmium-translocating P-type ATPase [Candidatus Woesebacteria bacterium] diamond 651 311 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
28854398 28854398 PRJNA827593_P_NODE_34908_length_347_cov_1.124088_g34609_i0 PRJNA827593 34908 347 1.124088 3.90058536 Candidatus Woesebacteria bacterium RIFCSPHIGHO2_ 2026804 Bacteria Bacteria 108 9.29e-26   NR OGM23131.1 1802494 g34609 i0 46 0.976945244956772 113 61 97.7 0 340 2 150 262 OGM23131.1 MAG: hypothetical protein A2865_04620 [Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_17] diamond 339 108 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;