RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA827593", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Curtissiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Curtissiibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA827593 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27117473 27117473 PRJNA827593_P_NODE_11862_length_636_cov_2.751332_g11570_i0 PRJNA827593 11862 636 2.751332 17.49847152 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 211 1.28e-63   NR MCR4324341.1 2750075 g11570 i0 71.6 2.52358490566038 134 38 63.2 0 2 403 126 259 MCR4324341.1 alpha/beta fold hydrolase [Candidatus Curtissbacteria bacterium] diamond 1605 211 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;