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contig_metadata

7 rows where bioproject = "PRJNA826497" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 7 ✖

bioproject 1

  • PRJNA826497 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11024398 11024398 PRJNA826497_S_NODE_7789_length_201_cov_3.720238_g7749_i0 PRJNA826497 7789 201 3.720238 7.47767838 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 52.8 0.017   NTclustered gi|2695672541|gb|CP118754.2| 1452353 g7749 i0 100 0.139303482587065 28 0 14 0 158 185 141713 141740 Methanosphaera sp. ISO3-F5 plasmid pNP174, complete sequence blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
23773083 23773083 PRJNA826497_S_NODE_5359_length_223_cov_4.863158_g5319_i0 PRJNA826497 5359 223 4.863158 10.84484234 archaeon 1906665 Archaea Archaea 118 1.09e-31   NR MDP2435966.1 1906665 g5319 i0 70.8 5.91928251121076 72 21 96.9 0 223 8 101 172 MDP2435966.1 nucleoside-diphosphate kinase [archaeon] diamond 1320 118 1 Archaea               archaeon
27559846 27559846 PRJNA826497_S_NODE_544_length_393_cov_3.830556_g504_i0 PRJNA826497 544 393 3.830556 15.05408508 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 72.4 7.62e-13   NR MDD5589059.1 2910166 g504 i0 44.6 2.2824427480916 74 41 56.5 0 232 11 1 74 MDD5589059.1 NUMOD4 domain-containing protein [Candidatus Nanoarchaeia archaeon] diamond 897 72.4 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
28128479 28128479 PRJNA826497_S_NODE_19465_length_152_cov_2.361345_g19425_i0 PRJNA826497 19465 152 2.361345 3.5892444 Nanobdellota archaeon 2026764 Archaea Archaea 55.5 3.44e-7   NR MBU0757338.1 2026764 g19425 i0 55.1 1.875 49 22 96.7 0 151 5 181 229 MBU0757338.1 MFS transporter [Nanoarchaeota archaeon] diamond 285 55.5 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29896619 29896619 PRJNA826497_S_NODE_16331_length_161_cov_1.445312_g16291_i0 PRJNA826497 16331 161 1.445312 2.32695232 Nitrosarchaeum sp. 2026886 Archaea Archaea 108 9.89e-27   NR TAK16889.1 2026886 g16291 i0 94.3 0.987577639751553 53 3 98.8 0 3 161 211 263 TAK16889.1 MAG: FkbM family methyltransferase [Nitrosarchaeum sp.] diamond 159 108 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
31887678 31887678 PRJNA826497_S_NODE_1297_length_317_cov_4.774648_g1257_i0 PRJNA826497 1297 317 4.774648 15.13563416 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 53.9 4.25e-6   NR MCK5606851.1 2026773 g1257 i0 35.6 0.984227129337539 104 60 97.5 3 315 7 91 188 MCK5606851.1 methyltransferase domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 312 53.9 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32077595 32077595 PRJNA826497_S_NODE_17238_length_158_cov_2.728000_g17198_i0 PRJNA826497 17238 158 2.728 4.31024 Methanobacteriaceae archaeon 2099680 Archaea Archaea 91.7 6.26e-20   NR MBX7076496.1 2099680 g17198 i0 87.5 0.911392405063291 48 6 91.1 0 144 1 64 111 MBX7076496.1 F0F1 ATP synthase subunit alpha [Methanobacteriaceae archaeon] diamond 144 91.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;