contig_metadata
6 rows where bioproject = "PRJNA826497", tax_phylum = "Thermodesulfobacteriota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2503746 | 2503746 | PRJNA826497_S_NODE_2642_length_266_cov_8.991416_g2602_i0 | PRJNA826497 | 2642 | 266 | 8.991416 | 23.91716656 | Desulfobacca | 60892 | Bacteria | Bacteria | 191 | 4.940000000000001e-44 | NTclustered | gi|470488362|ref|NR_076865.1| | 60893 | g2602 | i0 | 85.263 | 139.353383458647 | 190 | 23 | 70 | 4 | 2 | 187 | 558 | 370 | Desulfobacca acetoxidans strain ASRB2 23S ribosomal RNA gene, complete sequence | blastn | 37068 | 191 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobaccia | Desulfobaccales | Desulfobaccaceae | Desulfobacca | Desulfobacca acetoxidans | ||
| 6332300 | 6332300 | PRJNA826497_S_NODE_1085_length_330_cov_12.340067_g1045_i0 | PRJNA826497 | 1085 | 330 | 12.340067 | 40.7222211 | Desulfobulbus | 893 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|470487339|ref|NR_076814.1| | 894 | g1045 | i0 | 96.97 | 1.1 | 33 | 1 | 10 | 0 | 92 | 124 | 1623 | 1655 | Desulfobulbus propionicus strain 1pr3 23S ribosomal RNA gene, complete sequence | blastn | 363 | 56.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus propionicus | ||
| 13574207 | 13574207 | PRJNA826497_S_NODE_6931_length_208_cov_2.880000_g6891_i0 | PRJNA826497 | 6931 | 208 | 2.88 | 5.9904 | Desulfobulbus propionicus | 894 | Bacteria | Bacteria | 243 | 1.01e-59 | NTclustered | gi|320120648|gb|CP002364.1| | 577650 | g6891 | i0 | 88.5 | 2.78846153846154 | 200 | 23 | 96 | 0 | 9 | 208 | 3065796 | 3065597 | Desulfobulbus propionicus DSM 2032, complete genome | blastn | 580 | 243 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus propionicus | ||
| 20354570 | 20354570 | PRJNA826497_S_NODE_11696_length_179_cov_1.232877_g11656_i0 | PRJNA826497 | 11696 | 179 | 1.232877 | 2.20684983 | Candidatus Electrothrix | 1859128 | Bacteria | Bacteria | 158 | 3.12e-34 | NTclustered | gi|2755823080|gb|CP159373.1| | 3062594 | g11656 | i0 | 82.955 | 68.9162011173184 | 176 | 28 | 98 | 2 | 1 | 176 | 2295742 | 2295569 | MAG: Candidatus Electrothrix aestuarii isolate Rat1 chromosome, complete genome | blastn | 12336 | 158 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electrothrix | Candidatus Electrothrix aestuarii | ||
| 30559752 | 30559752 | PRJNA826497_S_NODE_15273_length_164_cov_3.190840_g15233_i0 | PRJNA826497 | 15273 | 164 | 3.19084 | 5.2329776 | Desulfuromonadaceae bacterium | 2099677 | Bacteria | Bacteria | 64.3 | 9.65e-11 | NR | HEY3309762.1 | 2099677 | g15233 | i0 | 67.6 | 1.35365853658537 | 37 | 12 | 67.7 | 0 | 164 | 54 | 154 | 190 | HEY3309762.1 YceI family protein [Desulfuromonadaceae bacterium] | diamond | 222 | 64.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonadaceae bacterium | |||
| 32371194 | 32371194 | PRJNA826497_S_NODE_1799_length_292_cov_2.776062_g1759_i0 | PRJNA826497 | 1799 | 292 | 2.776062 | 8.10610104 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 140 | 2.98e-41 | NR | PLX99022.1 | 892 | g1759 | i0 | 77 | 8.02397260273973 | 87 | 20 | 89.4 | 0 | 3 | 263 | 10 | 96 | PLX99022.1 MAG: addiction module antitoxin RelB [Desulfuromonas sp.] | diamond | 2343 | 141 | 0.99290780141844 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonas | Desulfuromonas sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;