RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA826497" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA826497 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8473556 8473556 PRJNA826497_S_NODE_4327_length_235_cov_22.108911_g4287_i0 PRJNA826497 4327 235 22.108911 51.95594085 Glomus sp. Tf 2-16 262042 Fungi Fungi 375 1.1e-99   NTclustered gi|41353938|gb|AY522919.1| 262042 g4287 i0 95.708 42.268085106383 233 10 99 0 3 235 273 41 Glomus sp. Tf 2-16 26S ribosomal RNA gene, partial sequence blastn 9933 375 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Glomus Glomus sp. Tf 2-16
9748639 9748639 PRJNA826497_S_NODE_15048_length_165_cov_2.454545_g15008_i0 PRJNA826497 15048 165 2.454545 4.04999925 uncultured Mucoromycota 2021989 Fungi Fungi 86.1 1.36e-12   NTclustered gi|2029249899|gb|MZ018085.1| 2021989 g15008 i0 78.472 1.73939393939394 144 22 84 9 27 165 136 275 Uncultured Mucoromycota clone AL_Hs_336 large subunit ribosomal RNA gene, partial sequence blastn 287 86.1 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Mucoromycota
11432022 11432022 PRJNA826497_S_NODE_5389_length_223_cov_2.057895_g5349_i0 PRJNA826497 5389 223 2.057895 4.58910585 Mucorales 4827 Fungi Fungi 189 1.4499999999999999e-43   NTclustered gi|2837767459|ref|XM_069386175.1| 4840 g5349 i0 89.865 71.9775784753363 148 13 66 2 76 222 719 573 Rhizomucor pusillus 60S ribosomal protein uL2 (VTP01DRAFT_7190), partial mRNA blastn 16051 189 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
18671936 18671936 PRJNA826497_S_NODE_17695_length_156_cov_26.414634_g17655_i0 PRJNA826497 17695 156 26.414634 41.20682904 Gilbertella persicaria 101096 Fungi Fungi 54.7 0.004   NTclustered gi|2323732066|ref|XM_051583620.1| 101096 g17655 i0 100 0.365384615384615 29 0 19 0 56 84 189 217 Gilbertella persicaria uncharacterized protein (B0P05DRAFT_636303), mRNA blastn 57 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
26737493 26737493 PRJNA826497_S_NODE_4861_length_229_cov_1.989796_g4821_i0 PRJNA826497 4861 229 1.989796 4.55663284 Entrophospora candida 984092 Fungi Fungi 99.8 5.27e-25   NR CAG8473716.1 984092 g4821 i0 59.7 1.61135371179039 62 25 81.2 0 7 192 20 81 CAG8473716.1 1899_t:CDS:2 [Entrophospora candida] diamond 369 99.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae Entrophospora Entrophospora candida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;