contig_metadata
8 rows where bioproject = "PRJNA826497" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26642804 | 26642804 | PRJNA826497_S_NODE_13201_length_172_cov_3.661871_g13161_i0 | PRJNA826497 | 13201 | 172 | 3.661871 | 6.29841812 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 67.8 | 1.27e-11 | NR | MEI8300531.1 | 2081524 | g13161 | i0 | 57.4 | 2.82558139534884 | 54 | 23 | 94.2 | 0 | 7 | 168 | 195 | 248 | MEI8300531.1 hypothetical protein [Chlamydiota bacterium] | diamond | 486 | 67.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 27054542 | 27054542 | PRJNA826497_S_NODE_4222_length_237_cov_5.612745_g4182_i0 | PRJNA826497 | 4222 | 237 | 5.612745 | 13.30220565 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 144 | 4.96e-39 | NR | MBX7065911.1 | 2052178 | g4182 | i0 | 90.1 | 4.49367088607595 | 71 | 7 | 89.9 | 0 | 224 | 12 | 360 | 430 | MBX7065911.1 hemolysin family protein [Parachlamydiales bacterium] | diamond | 1065 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 27442640 | 27442640 | PRJNA826497_S_NODE_8583_length_196_cov_2.116564_g8543_i0 | PRJNA826497 | 8583 | 196 | 2.116564 | 4.14846544 | Bacteria | 2 | Bacteria | Bacteria | 87 | 1.66e-18 | NR | OGN64859.1 | 1797605 | g8543 | i0 | 59.4 | 1.95918367346939 | 64 | 26 | 98 | 0 | 194 | 3 | 246 | 309 | OGN64859.1 MAG: methionyl-tRNA formyltransferase [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9] | diamond | 384 | 87.4 | 0.995423340961098 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 | |||||
| 29801666 | 29801666 | PRJNA826497_S_NODE_6891_length_208_cov_5.440000_g6851_i0 | PRJNA826497 | 6891 | 208 | 5.44 | 11.3152 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 92.4 | 6.2e-20 | NR | MBP7074583.1 | 2047756 | g6851 | i0 | 69.1 | 0.980769230769231 | 68 | 21 | 98.1 | 0 | 206 | 3 | 224 | 291 | MBP7074583.1 efflux transporter outer membrane subunit [Rhabdochlamydiaceae bacterium] | diamond | 204 | 92.4 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 30023057 | 30023057 | PRJNA826497_S_NODE_12571_length_175_cov_1.669014_g12531_i0 | PRJNA826497 | 12571 | 175 | 1.669014 | 2.9207745 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 48.1 | 1.78e-4 | NR | HEX4840242.1 | 2047756 | g12531 | i0 | 42.9 | 0.84 | 49 | 28 | 84 | 0 | 174 | 28 | 144 | 192 | HEX4840242.1 MC/SLC25 family protein [Rhabdochlamydiaceae bacterium] | diamond | 147 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 30094552 | 30094552 | PRJNA826497_S_NODE_14592_length_166_cov_8.902256_g14552_i0 | PRJNA826497 | 14592 | 166 | 8.902256 | 14.77774496 | Bacteria | 2 | Bacteria | Bacteria | 96.3 | 4.79e-22 | NR | OGN55585.1 | 1797598 | g14552 | i0 | 76.4 | 3.97590361445783 | 55 | 13 | 99.4 | 0 | 165 | 1 | 87 | 141 | OGN55585.1 MAG: hypothetical protein A2796_04455 [Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39] | diamond | 660 | 97.1 | 0.991761071060762 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39 | |||||
| 31603182 | 31603182 | PRJNA826497_S_NODE_4556_length_233_cov_3.190000_g4516_i0 | PRJNA826497 | 4556 | 233 | 3.19 | 7.4327 | Chlamydiia bacterium | 2052156 | Bacteria | Bacteria | 57.4 | 2.18e-7 | NR | MBI3508849.1 | 2052156 | g4516 | i0 | 43.4 | 0.978540772532189 | 76 | 40 | 94 | 1 | 1 | 219 | 118 | 193 | MBI3508849.1 TIGR04372 family glycosyltransferase [Chlamydiia bacterium] | diamond | 228 | 57.4 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiia bacterium | ||||
| 31856054 | 31856054 | PRJNA826497_S_NODE_5877_length_217_cov_12.179348_g5837_i0 | PRJNA826497 | 5877 | 217 | 12.179348 | 26.42918516 | Chlamydia ibidis | 1405396 | Bacteria | Bacteria | 42.7 | 0.00197 | NR | EPP34933.1 | 1405396 | g5837 | i0 | 69.2 | 0.359447004608295 | 26 | 8 | 35.9 | 0 | 216 | 139 | 5 | 30 | EPP34933.1 hypothetical protein CP10139811_1159, partial [Chlamydia ibidis] | diamond | 78 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia ibidis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;