RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA826497", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA826497 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27054541 27054541 PRJNA826497_S_NODE_3642_length_246_cov_5.647887_g3602_i0 PRJNA826497 3642 246 5.647887 13.89380202 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 54.3 2.48e-6   NR TEB19254.1 2494336 g3602 i0 40.5 0.902439024390244 74 43 89 1 26 244 161 234 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 222 54.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
28759760 28759760 PRJNA826497_S_NODE_1467_length_306_cov_24.721612_g1427_i0 PRJNA826497 1467 306 24.721612 75.64813272 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 64.7 8.17e-10   NR TEB19254.1 2494336 g1427 i0 69.8 0.42156862745098 43 13 42.2 0 61 189 221 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 129 64.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;