RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA826497", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA826497 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9748640 9748640 PRJNA826497_S_NODE_1508_length_304_cov_9.435424_g1468_i0 PRJNA826497 1508 304 9.435424 28.68368896 Cercomonas sp. HFCC548 458873 SAR_Eukaryotes SAR_Eukaryotes 424 5.21e-114   NTclustered gi|161015713|gb|EF681947.1| 458873 g1468 i0 94.834 89.3453947368421 271 14 89 0 18 288 1 271 Cercomonas sp. HFCC548 28S ribosomal RNA gene, partial sequence blastn 27161 424 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC548
18671980 18671980 PRJNA826497_S_NODE_8255_length_198_cov_2.672727_g8215_i0 PRJNA826497 8255 198 2.672727 5.29199946 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 311 2.5600000000000003e-80   NTclustered gi|238617605|gb|FJ973380.1| 45107 g8215 i0 94.949 89.8484848484848 198 10 100 0 1 198 1548 1351 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 17790 311 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
22497357 22497357 PRJNA826497_S_NODE_14838_length_165_cov_23.333333_g14798_i0 PRJNA826497 14838 165 23.333333 38.49999945 Cercozoa sp. W36p59t2LS 563766 SAR_Eukaryotes SAR_Eukaryotes 283 4.4899999999999995e-72   NTclustered gi|219524790|gb|EU709153.1| 563766 g14798 i0 99.359 89.1151515151515 156 1 95 0 3 158 521 676 Cercozoa sp. W36p59t2LS 18S ribosomal RNA gene, partial sequence blastn 14704 283 1 Eukaryota Sar   Cercozoa         Cercozoa sp. W36p59t2LS

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;