RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA826497", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA826497 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14848729 14848729 PRJNA826497_S_NODE_7012_length_207_cov_4.833333_g6972_i0 PRJNA826497 7012 207 4.833333 10.00499931 Orpinomyces sp. OUS1 301046 Fungi Fungi 80.5 8.31e-11   NTclustered gi|55859492|emb|AJ864475.1| 301046 g6972 i0 78.358 46.9806763285024 134 21 62 7 71 199 4716 4586 Orpinomyces sp. OUS1 partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA, clone V5-1 blastn 9725 80.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Orpinomyces Orpinomyces sp. OUS1
30062994 30062994 PRJNA826497_S_NODE_5391_length_223_cov_1.894737_g5351_i0 PRJNA826497 5391 223 1.894737 4.2252635099999996 root 1 Root_unresolved Root_unresolved 46.2 0.00165   NR KAJ3044356.1 64517 g5351 i0 42.9 2.67713004484305 49 27 64.6 1 6 149 385 433 KAJ3044356.1 hypothetical protein HDV00_002248 [Rhizophlyctis rosea] diamond 597 46.6 0.991416309012876 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
31286644 31286644 PRJNA826497_S_NODE_7795_length_201_cov_3.511905_g7755_i0 PRJNA826497 7795 201 3.511905 7.05892905 Phlyctochytrium planicorne 261098 Fungi Fungi 89.4 1.87e-20   NR KAJ3096340.1 261098 g7755 i0 68.3 0.940298507462687 63 20 94 0 13 201 48 110 KAJ3096340.1 hypothetical protein HDU97_006013 [Phlyctochytrium planicorne] diamond 189 89.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
31327000 31327000 PRJNA826497_S_NODE_19395_length_152_cov_3.050420_g19355_i0 PRJNA826497 19395 152 3.05042 4.6366384 Eukaryota 2759 Fungi Fungi 67.8 1.53e-11   NR KAJ3254294.1 261099 g19355 i0 71.4 12.3947368421053 49 13 94.7 1 147 4 233 281 KAJ3254294.1 heme peroxidase [Boothiomyces macroporosus] diamond 1884 68.2 0.994134897360704 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Terramycetaceae Boothiomyces Boothiomyces macroporosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;