RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA826497", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA826497 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27086165 27086165 PRJNA826497_S_NODE_10442_length_184_cov_8.344371_g10402_i0 PRJNA826497 10442 184 8.344371 15.35364264 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 104 2.32e-24   NR MBR3176676.1 2026720 g10402 i0 84.7 1.89130434782609 59 9 96.2 0 7 183 500 558 MBR3176676.1 ABC transporter ATP-binding protein [Candidatus Saccharibacteria bacterium] diamond 348 104 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28665207 28665207 PRJNA826497_S_NODE_19467_length_152_cov_2.319328_g19427_i0 PRJNA826497 19467 152 2.319328 3.52537856 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 55.8 2.52e-7   NR MDB5162896.1 2026720 g19427 i0 52 1.85526315789474 50 24 98.7 0 151 2 191 240 MDB5162896.1 clpA2 [Candidatus Saccharibacteria bacterium] diamond 282 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29264815 29264815 PRJNA826497_S_NODE_16549_length_160_cov_2.763780_g16509_i0 PRJNA826497 16549 160 2.76378 4.422048 Candidatus Nanosynbacter sp. 2725945 Bacteria Bacteria 105 9.66e-25   NR MBF1043735.1 2725945 g16509 i0 96.2 3.975 53 2 99.4 0 160 2 191 243 MBF1043735.1 DNA gyrase subunit A [Candidatus Nanosynbacter sp.] diamond 636 105 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp.
30726551 30726551 PRJNA826497_S_NODE_20134_length_150_cov_4.170940_g20094_i0 PRJNA826497 20134 150 4.17094 6.25641 Bacteria 2 Bacteria Bacteria 88.2 9.87e-19   NR OJU87555.1 1895829 g20094 i0 95.8 20.04 48 2 96 0 149 6 306 353 OJU87555.1 MAG: DNA ligase (NAD(+)) LigA [Candidatus Saccharibacteria bacterium 49-20] diamond 3006 88.6 0.99548532731377 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;