RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA826497" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA826497 · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2096196 2096196 PRJNA826497_S_NODE_7642_length_202_cov_3.591716_g7602_i0 PRJNA826497 7642 202 3.591716 7.25526632 Thecamonas trahens 529818 Root_unresolved Root_unresolved 89.8 1.34e-13   NTclustered gi|923122628|ref|XM_013899330.1| 461836 g7602 i0 90.909 2.71287128712871 66 6 33 0 137 202 2585 2520 Thecamonas trahens ATCC 50062 major vault protein (AMSG_09422), mRNA blastn 548 89.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31065757 31065757 PRJNA826497_S_NODE_7895_length_200_cov_6.431138_g7855_i0 PRJNA826497 7895 200 6.431138 12.862276 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 42.7 0.021   NR XP_013761036.1 461836 g7855 i0 69.2 0.39 26 8 39 0 3 80 404 429 XP_013761036.1 uncharacterized protein AMSG_02003 [Thecamonas trahens ATCC 50062] diamond 78 42.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;