RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA825466", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Preplasmiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA825466 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5056173 5056173 PRJNA825466_P_NODE_17304_length_250_cov_1.677966_g17203_i0 PRJNA825466 17304 250 1.677966 4.194915 root 1 Root_unresolved Root_unresolved 462 8.83e-126   NTclustered gi|2288721861|gb|OP218818.1| 10535 g17203 i0 100 100 250 0 100 0 1 250 1859 2108 Unidentified adenovirus strain CHOP Ad5 blastn 25000 462 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
22905694 22905694 PRJNA825466_P_NODE_5238_length_348_cov_1.120000_g5137_i0 PRJNA825466 5238 348 1.12 3.8976 root 1 Root_unresolved Root_unresolved 643 4.279999999999998e-180   NTclustered gi|2288721861|gb|OP218818.1| 10535 g5137 i0 100 100.086206896552 348 0 100 0 1 348 1408 1061 Unidentified adenovirus strain CHOP Ad5 blastn 34830 643 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;