RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA825466" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA825466 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
820462 820462 PRJNA825466_P_NODE_3941_length_383_cov_0.993548_g3840_i0 PRJNA825466 3941 383 0.993548 3.80528884 Diplorchis hangzhouensis 1131906 Platyhelminthes Platyhelminthes 54.7 0.01   NTclustered gi|379771686|gb|JQ038227.1| 1131906 g3840 i0 100 0.0757180156657963 29 0 8 0 218 246 5361 5389 Diplorchis hangzhouensis mitochondrion sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Diplorchis Diplorchis hangzhouensis
8473370 8473370 PRJNA825466_P_NODE_5207_length_348_cov_5.320000_g5106_i0 PRJNA825466 5207 348 5.32 18.5136 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 62.1 5.48e-5   NTclustered gi|687189247|emb|LN182460.1| 99802 g5106 i0 97.222 2.55747126436782 36 1 10 0 310 345 472 507 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0159298 blastn 890 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
26936479 26936479 PRJNA825466_P_NODE_4482_length_366_cov_2.102389_g4381_i0 PRJNA825466 4482 366 2.102389 7.69474374 Opisthokonta 33154 Platyhelminthes Platyhelminthes 102 1e-24   NR KAA3675271.1 34504 g4381 i0 43 3.86885245901639 121 67 99.2 1 366 4 27 145 KAA3675271.1 small subunit ribosomal protein S24e, partial [Paragonimus westermani] diamond 1416 102 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani
27559829 27559829 PRJNA825466_P_NODE_15864_length_253_cov_1.283333_g15763_i0 PRJNA825466 15864 253 1.283333 3.24683249 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 65.1 5.33e-10   NR PAA93605.1 282301 g15763 i0 37.5 1.89723320158103 80 50 94.9 0 3 242 160 239 PAA93605.1 hypothetical protein BOX15_Mlig031413g1 [Macrostomum lignano] diamond 480 65.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
30749565 30749565 PRJNA825466_P_NODE_10874_length_282_cov_1.306220_g10773_i0 PRJNA825466 10874 282 1.30622 3.6835404 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 48.5 5.24e-4   NR PAA93605.1 282301 g10773 i0 32.2 1.85106382978723 87 57 92.6 1 11 271 342 426 PAA93605.1 hypothetical protein BOX15_Mlig031413g1 [Macrostomum lignano] diamond 522 48.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
32812705 32812705 PRJNA825466_P_NODE_1160_length_639_cov_2.390459_g1064_i0 PRJNA825466 1160 639 2.390459 15.27503301 root 1 Root_unresolved Root_unresolved 134 3.4399999999999993e-34   NR VDL51394.1 6216 g1064 i0 39.9 2.63849765258216 193 111 88.7 3 2 568 90 281 VDL51394.1 unnamed protein product [Hymenolepis diminuta] diamond 1686 134 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;